RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

29 rows where bioproject = "PRJEB8827", tax_clade = "Opisthokonta" and tax_phylum = "Platyhelminthes"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 29 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 29 ✖

bioproject 1

  • PRJEB8827 · 29 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25617571 25617571 PRJEB8827d_S_NODE_369_length_293_cov_2671.321705_g365_i0 PRJEB8827 369 293 2671.321705 7826.97259565 root 1 Root_unresolved Root_unresolved 113 1.23e-20   NTclustered gi|687789777|emb|LK829830.1| 57078 g365 i0 97.059 23.4300341296928 68 0 23 2 226 293 536 601 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6865 113 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
25617803 25617803 PRJEB8827g_S_NODE_745_length_322_cov_1840.756098_g724_i0 PRJEB8827 745 322 1840.756098 5927.23463556 root 1 Root_unresolved Root_unresolved 113 1.37e-20   NTclustered gi|687789777|emb|LK829830.1| 57078 g724 i0 98.438 21.2267080745342 64 1 20 0 1 64 601 538 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6835 113 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
25754035 25754035 PRJEB8827g_S_NODE_530_length_363_cov_3060.317073_g509_i0 PRJEB8827 530 363 3060.317073 11108.95097499 root 1 Root_unresolved Root_unresolved 113 1.56e-20   NTclustered gi|687789777|emb|LK829830.1| 57078 g509 i0 98.438 18.6446280991736 64 1 18 0 1 64 601 538 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6768 113 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
25754040 25754040 PRJEB8827g_S_NODE_994_length_293_cov_1.736434_g973_i0 PRJEB8827 994 293 1.736434 5.08775162 Metazoa 33208 Platyhelminthes Platyhelminthes 531 2.86e-146   NTclustered gi|60687563|gb|AY914894.1| 6182 g973 i0 99.655 99.9795221843003 290 1 99 0 1 290 474 763 Schistosoma japonicum unknown mRNA blastn 29294 531 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
25889522 25889522 PRJEB8827b_S_NODE_227_length_444_cov_1069.911980_g175_i0 PRJEB8827 227 444 1069.91198 4750.4091912 root 1 Root_unresolved Root_unresolved 113 1.94e-20   NTclustered gi|687789777|emb|LK829830.1| 57078 g175 i0 98.438 15.25 64 1 14 0 381 444 538 601 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6771 113 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
25889538 25889538 PRJEB8827c_S_NODE_475_length_209_cov_30734.247126_g462_i0 PRJEB8827 475 209 30734.247126 64234.57649334 root 1 Root_unresolved Root_unresolved 108 3.86e-19   NTclustered gi|687789777|emb|LK829830.1| 57078 g462 i0 98.387 29.4641148325359 62 0 30 1 1 62 595 535 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6158 108 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
25889744 25889744 PRJEB8827g_S_NODE_1379_length_261_cov_12003.796460_g1358_i0 PRJEB8827 1379 261 12003.79646 31329.9087606 root 1 Root_unresolved Root_unresolved 113 1.08e-20   NTclustered gi|687789777|emb|LK829830.1| 57078 g1358 i0 98.438 26.0191570881226 64 1 25 0 1 64 601 538 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6791 113 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
25889762 25889762 PRJEB8827g_S_NODE_8931_length_162_cov_2.110236_g8910_i0 PRJEB8827 8931 162 2.110236 3.41858232 Metazoa 33208 Platyhelminthes Platyhelminthes 300 4.36e-77   NTclustered gi|60687563|gb|AY914894.1| 6182 g8910 i0 100 100 162 0 100 0 1 162 105 266 Schistosoma japonicum unknown mRNA blastn 16200 300 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
25937853 25937853 PRJEB8827c_S_NODE_20_length_608_cov_8863.324607_g9_i0 PRJEB8827 20 608 8863.324607 53889.01361056 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 110 3.52e-19   NTclustered gi|687789777|emb|LK829830.1| 57078 g9 i0 100 10.4605263157895 59 0 10 0 1 59 595 537 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6360 110 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
25938537 25938537 PRJEB8827f_S_NODE_8300_length_187_cov_1.644737_g8280_i0 PRJEB8827 8300 187 1.644737 3.07565819 Notocaryoplana arctica 993670 Platyhelminthes Platyhelminthes 119 1.56e-22   NTclustered gi|588313911|gb|KC869869.1| 993670 g8280 i0 84.298 2.0855614973262 121 19 65 0 67 187 1486 1366 Notocaryoplana arctica 28S ribosomal RNA gene, partial sequence blastn 390 119 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Proseriata Otoplanidae Notocaryoplana Notocaryoplana arctica
26025843 26025843 PRJEB8827b_S_NODE_1196_length_276_cov_2584.153527_g1144_i0 PRJEB8827 1196 276 2584.153527 7132.26373452 root 1 Root_unresolved Root_unresolved 115 3.1900000000000003e-21   NTclustered gi|687789777|emb|LK829830.1| 57078 g1144 i0 98.462 42.445652173913 65 1 24 0 1 65 602 538 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 11715 115 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26025859 26025859 PRJEB8827b_S_NODE_428_length_368_cov_1739.972973_g376_i0 PRJEB8827 428 368 1739.972973 6403.10054064 root 1 Root_unresolved Root_unresolved 110 2.05e-19   NTclustered gi|687789777|emb|LK829830.1| 57078 g376 i0 95.588 18.0326086956522 68 3 18 0 301 368 532 599 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6636 110 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26025866 26025866 PRJEB8827d_S_NODE_1076_length_218_cov_1328.622951_g1072_i0 PRJEB8827 1076 218 1328.622951 2896.39803318 root 1 Root_unresolved Root_unresolved 52.8 0.019   NTclustered gi|687634436|emb|LK866398.1| 57078 g1072 i0 100 0.256880733944954 28 0 13 0 180 207 32 5 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0100110 blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26073838 26073838 PRJEB8827d_S_NODE_965_length_224_cov_571.910053_g961_i0 PRJEB8827 965 224 571.910053 1281.07851872 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 69.4 1.98e-7   NTclustered gi|687789777|emb|LK829830.1| 57078 g961 i0 100 17.1205357142857 37 0 17 0 188 224 535 571 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 3835 69.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26074706 26074706 PRJEB8827h_S_NODE_581_length_351_cov_811.373418_g562_i0 PRJEB8827 581 351 811.373418 2847.92069718 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 69.4 3.29e-7   NTclustered gi|687789777|emb|LK829830.1| 57078 g562 i0 100 10.8660968660969 37 0 11 0 1 37 571 535 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 3814 69.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26161980 26161980 PRJEB8827b_S_NODE_621_length_333_cov_3184.724832_g569_i0 PRJEB8827 621 333 3184.724832 10605.13369056 root 1 Root_unresolved Root_unresolved 110 1.84e-19   NTclustered gi|687789777|emb|LK829830.1| 57078 g569 i0 98.387 20.1831831831832 62 1 19 0 1 62 599 538 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6721 111 0.990990990990991 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26162208 26162208 PRJEB8827g_S_NODE_2493_length_208_cov_3.745665_g2472_i0 PRJEB8827 2493 208 3.745665 7.7909832 root 1 Root_unresolved Root_unresolved 56.5 0.001   NTclustered gi|687634436|emb|LK866398.1| 57078 g2472 i0 100 0.740384615384615 30 0 14 0 179 208 32 3 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0100110 blastn 154 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26210052 26210052 PRJEB8827b_S_NODE_1494_length_259_cov_1345.973214_g1442_i0 PRJEB8827 1494 259 1345.973214 3486.07062426 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 113 1.07e-20   NTclustered gi|687789777|emb|LK829830.1| 57078 g1442 i0 98.438 25.980694980695 64 1 25 0 1 64 600 537 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6729 113 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26210088 26210088 PRJEB8827c_S_NODE_262_length_238_cov_24799.443350_g249_i0 PRJEB8827 262 238 24799.44335 59022.675173 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 111 3.48e-20   NTclustered gi|687789777|emb|LK829830.1| 57078 g249 i0 100 25.5756302521008 60 0 25 0 1 60 595 536 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6087 111 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26297760 26297760 PRJEB8827b_S_NODE_2022_length_241_cov_2469.247573_g1970_i0 PRJEB8827 2022 241 2469.247573 5950.88665093 root 1 Root_unresolved Root_unresolved 111 3.53e-20   NTclustered gi|687789777|emb|LK829830.1| 57078 g1970 i0 98.438 29.4066390041494 64 0 27 1 1 64 600 538 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 7087 111 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26297770 26297770 PRJEB8827b_S_NODE_470_length_359_cov_873.040123_g418_i0 PRJEB8827 470 359 873.040123 3134.21404157 root 1 Root_unresolved Root_unresolved 108 7.16e-19   NTclustered gi|687789777|emb|LK829830.1| 57078 g418 i0 98.361 18.3760445682451 61 1 17 0 4 64 598 538 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6597 108 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26297785 26297785 PRJEB8827c_S_NODE_62_length_372_cov_15681.961424_g49_i0 PRJEB8827 62 372 15681.961424 58336.89649728 root 1 Root_unresolved Root_unresolved 108 7.44e-19   NTclustered gi|687789777|emb|LK829830.1| 57078 g49 i0 100 16.6209677419355 58 0 16 0 1 58 595 538 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6183 108 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26297789 26297789 PRJEB8827d_S_NODE_54_length_494_cov_7014.827887_g51_i0 PRJEB8827 54 494 7014.827887 34653.24976178 root 1 Root_unresolved Root_unresolved 113 2.18e-20   NTclustered gi|687789777|emb|LK829830.1| 57078 g51 i0 98.438 13.7874493927126 64 1 13 0 1 64 601 538 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6811 113 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26297993 26297993 PRJEB8827g_S_NODE_1238_length_272_cov_5950.586498_g1217_i0 PRJEB8827 1238 272 5950.586498 16185.59527456 root 1 Root_unresolved Root_unresolved 110 1.46e-19   NTclustered gi|687789777|emb|LK829830.1| 57078 g1217 i0 98.387 24.6029411764706 62 1 23 0 211 272 539 600 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6692 111 0.990990990990991 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26433843 26433843 PRJEB8827b_S_NODE_2335_length_233_cov_2827.287879_g2283_i0 PRJEB8827 2335 233 2827.287879 6587.58075807 root 1 Root_unresolved Root_unresolved 115 2.6200000000000003e-21   NTclustered gi|687789777|emb|LK829830.1| 57078 g2283 i0 98.462 50.2789699570815 65 1 28 0 1 65 602 538 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 11715 115 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26433864 26433864 PRJEB8827c_S_NODE_255_length_240_cov_25963.931707_g242_i0 PRJEB8827 255 240 25963.931707 62313.4360968 root 1 Root_unresolved Root_unresolved 108 4.54e-19   NTclustered gi|687789777|emb|LK829830.1| 57078 g242 i0 100 25.4916666666667 58 0 24 0 1 58 595 538 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6118 108 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26482119 26482119 PRJEB8827b_S_NODE_1632_length_253_cov_724.527523_g1580_i0 PRJEB8827 1632 253 724.527523 1833.05463319 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 69.4 2.28e-7   NTclustered gi|687789777|emb|LK829830.1| 57078 g1580 i0 100 15.6126482213439 37 0 15 0 217 253 535 571 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 3950 69.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26569782 26569782 PRJEB8827b_S_NODE_1408_length_264_cov_4038.860262_g1356_i0 PRJEB8827 1408 264 4038.860262 10662.59109168 root 1 Root_unresolved Root_unresolved 110 1.41e-19   NTclustered gi|687789777|emb|LK829830.1| 57078 g1356 i0 98.387 25.5530303030303 62 1 23 0 1 62 599 538 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6746 110 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26569926 26569926 PRJEB8827f_S_NODE_2064_length_289_cov_5672.960630_g2044_i0 PRJEB8827 2064 289 5672.96063 16394.8562207 root 1 Root_unresolved Root_unresolved 111 4.35e-20   NTclustered gi|687789777|emb|LK829830.1| 57078 g2044 i0 97.015 23.2733564013841 67 1 23 1 1 67 600 535 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6726 111 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;