RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB83711" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB83711 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27382131 27382131 PRJEB83711_P_NODE_68663_length_247_cov_0.896552_g68397_i0 PRJEB83711 68663 247 0.896552 2.21448344 Armatimonadota bacterium 2033014 Bacteria Bacteria 145 1.93e-39   NR MCC2667939.1 2033014 g68397 i0 80.5 0.995951417004049 82 16 99.6 0 247 2 227 308 MCC2667939.1 b-glycosidase [Armatimonadota bacterium] diamond 246 145 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31551559 31551559 PRJEB83711_P_NODE_74456_length_244_cov_0.912281_g74190_i0 PRJEB83711 74456 244 0.912281 2.22596564 Armatimonadota bacterium 2033014 Bacteria Bacteria 85.5 3.4e-17   NR HOM72321.1 2033014 g74190 i0 56.3 2.95081967213115 80 35 98.4 0 240 1 370 449 HOM72321.1 hypothetical protein [Armatimonadota bacterium] diamond 720 85.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32342468 32342468 PRJEB83711_P_NODE_65679_length_249_cov_0.886364_g65413_i0 PRJEB83711 65679 249 0.886364 2.20704636 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 127 2.0899999999999998e-32   NR CAA9295550.1 157466 g65413 i0 79.3 0.987951807228916 82 14 98.8 1 3 248 402 480 CAA9295550.1 Hemolysins and related proteins containing CBS domains [uncultured Armatimonadetes bacterium] diamond 246 127 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;