RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB83711", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJEB83711 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
144369 144369 PRJEB83711_P_NODE_59441_length_252_cov_0.871508_g59175_i0 PRJEB83711 59441 252 0.871508 2.19620016 Synergistaceae bacterium 2053624 Bacteria Bacteria 148 6.36e-41   NR MCE5202281.1 2053624 g59175 i0 82.1 2 84 15 100 0 252 1 256 339 MCE5202281.1 mitochondrial fission ELM1 family protein [Synergistaceae bacterium] diamond 504 148 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
2694195 2694195 PRJEB83711_P_NODE_45963_length_275_cov_1.534653_g45697_i0 PRJEB83711 45963 275 1.534653 4.22029575 Synergistaceae bacterium 2053624 Bacteria Bacteria 122 3.0099999999999997e-31   NR MCE5202578.1 2053624 g45697 i0 61.5 0.992727272727273 91 35 99.3 0 2 274 132 222 MCE5202578.1 histidinol-phosphate transaminase [Synergistaceae bacterium] diamond 273 122 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;