RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB83711" and tax_kingdom = "Thermoproteati"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJEB83711 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18850534 18850534 PRJEB83711_P_NODE_67175_length_248_cov_0.891429_g66909_i0 PRJEB83711 67175 248 0.891429 2.21074392 Saccharolobus 2100760 Archaea Archaea 54.7 0.006   NTclustered gi|2440481745|gb|CP046616.1| 43080 g66909 i0 100 1.08064516129032 29 0 12 0 139 167 1867082 1867054 Saccharolobus islandicus strain HVE 10/4 chromosome, complete genome blastn 268 54.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Saccharolobus Saccharolobus islandicus
29213561 29213561 PRJEB83711_P_NODE_72689_length_245_cov_0.906977_g72423_i0 PRJEB83711 72689 245 0.906977 2.22209365 Nitrososphaerota archaeon 2026795 Archaea Archaea 147 4.940000000000001e-44   NR MBI5697075.1 2026795 g72423 i0 88.9 0.991836734693878 81 9 99.2 0 243 1 7 87 MBI5697075.1 hypothetical protein [Nitrososphaerota archaeon] diamond 243 147 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
29749785 29749785 PRJEB83711_P_NODE_49951_length_267_cov_1.438144_g49685_i0 PRJEB83711 49951 267 1.438144 3.83984448 Candidatus Nitrosocosmicus sp. 2109671 Archaea Archaea 139 4.88e-37   NR HKO65857.1 2109671 g49685 i0 69.3 0.98876404494382 88 27 98.9 0 3 266 232 319 HKO65857.1 hypothetical protein [Candidatus Nitrosocosmicus sp.] diamond 264 139 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;