RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJEB83711", tax_kingdom = "Orthornavirae" and tax_phylum = "Negarnaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 3 ✖

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJEB83711 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5246713 5246713 PRJEB83711_P_NODE_43905_length_280_cov_1.014493_g43639_i0 PRJEB83711 43905 280 1.014493 2.8405804 brine shrimp yue-like virus 7 2900459 Viruses Viruses 512 9.85e-141   NTclustered gi|2209095278|gb|OL472843.1| 2900459 g43639 i0 99.643 5 280 1 100 0 1 280 849 570 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 2 hypothetical protein gene, complete cds blastn 1400 512 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
9071428 9071428 PRJEB83711_P_NODE_45628_length_276_cov_1.157635_g45362_i0 PRJEB83711 45628 276 1.157635 3.1950726 Sesamum betacytorhabdovirus 1_Cat 3078362 Viruses Viruses 501 2.1e-137   NTclustered gi|2618835764|tpg|BK064337.1| 3078362 g45362 i0 99.635 1.98550724637681 274 1 99 0 3 276 2650 2377 TPA_asm: Sesamum betacytorhabdovirus 1_Cat cRNA sequence blastn 548 501 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Sesamum betacytorhabdovirus 1_Cat
29971135 29971135 PRJEB83711_P_NODE_35711_length_302_cov_3.030568_g35445_i0 PRJEB83711 35711 302 3.030568 9.15231536 Morogoro maize-associated virus 2497337 Viruses Viruses 204 2.03e-64   NR YP_010087199.1 2497337 g35445 i0 95 0.993377483443709 100 5 99.3 0 2 301 99 198 YP_010087199.1 matrix protein [Morogoro maize-associated virus] diamond 300 204 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Alphanucleorhabdovirus Alphanucleorhabdovirus morogoromaydis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;