RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB83711", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB83711 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26622726 26622726 PRJEB83711_P_NODE_63221_length_250_cov_0.881356_g62955_i0 PRJEB83711 63221 250 0.881356 2.20339 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 142 2.3e-37   NR KAE9554717.1 2598192 g62955 i0 91 2.808 78 7 93.6 0 249 16 136 213 KAE9554717.1 hypothetical protein FO519_002045 [Halicephalobus sp. NKZ332] diamond 702 142 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
31329852 31329852 PRJEB83711_P_NODE_57196_length_253_cov_1.733333_g56930_i0 PRJEB83711 57196 253 1.733333 4.38533249 Mesorhabditis spiculigera 96644 Nematoda Nematoda 51.2 4.41e-5   NR CAJ0573722.1 96644 g56930 i0 51.7 1.37549407114625 58 13 68.8 1 79 252 694 736 CAJ0573722.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 348 51.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;