RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB83711", tax_kingdom = "Fungi" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB83711 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21821445 21821445 PRJEB83711_P_NODE_72338_length_245_cov_0.906977_g72072_i0 PRJEB83711 72338 245 0.906977 2.22209365 Radiomyces spectabilis 64574 Fungi Fungi 165 2.72e-36   NTclustered gi|2323708781|ref|XM_051563934.1| 64574 g72072 i0 82.039 11.9673469387755 206 25 82 10 3 202 287 88 Radiomyces spectabilis 60S ribosomal protein L23 (BYT42DRAFT_489353), partial mRNA blastn 2932 165 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis
27792626 27792626 PRJEB83711_P_NODE_74544_length_244_cov_0.912281_g74278_i0 PRJEB83711 74544 244 0.912281 2.22596564 Funneliformis geosporum 1117311 Fungi Fungi 104 7.7e-27   NR CAI2196570.1 1117311 g74278 i0 91.5 0.725409836065574 59 5 72.5 0 2 178 54 112 CAI2196570.1 4135_t:CDS:2, partial [Funneliformis geosporum] diamond 177 104 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Funneliformis Funneliformis geosporum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;