RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJEB83711", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 8 ✖

tax_clade 1

bioproject 1

  • PRJEB83711 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3970631 3970631 PRJEB83711_P_NODE_61564_length_251_cov_0.876404_g61298_i0 PRJEB83711 61564 251 0.876404 2.19977404 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 109 1.73e-26   NR AAL50117.1 77619 g61298 i0 73.2 5.09163346613546 71 19 84.9 0 249 37 110 180 AAL50117.1 actin, partial [Vorticella microstoma] diamond 1278 110 0.990909090909091 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella microstoma
6522488 6522488 PRJEB83711_P_NODE_51686_length_263_cov_5.063158_g51420_i0 PRJEB83711 51686 263 5.063158 13.31610554 Opisthonecta sp. FG-2015 1607889 SAR_Eukaryotes SAR_Eukaryotes 440 4.389999999999998e-119   NTclustered gi|759083562|gb|KM222179.1| 1607889 g51420 i0 96.947 83.7528517110266 262 8 99 0 1 262 367 628 Opisthonecta sp. FG-2015 voucher SZ2011052301 large subunit ribosomal RNA gene, partial sequence blastn 22027 440 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Opisthonectidae Opisthonecta Opisthonecta sp. FG-2015
12897216 12897216 PRJEB83711_P_NODE_28331_length_335_cov_11.629771_g28065_i0 PRJEB83711 28331 335 11.629771 38.95973285 Opisthonecta sp. FG-2015 1607889 SAR_Eukaryotes SAR_Eukaryotes 569 7.049999999999998e-158   NTclustered gi|759083562|gb|KM222179.1| 1607889 g28065 i0 98.16 93.5880597014925 326 6 97 0 1 326 1493 1818 Opisthonecta sp. FG-2015 voucher SZ2011052301 large subunit ribosomal RNA gene, partial sequence blastn 31352 569 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Opisthonectidae Opisthonecta Opisthonecta sp. FG-2015
13752214 13752214 PRJEB83711_P_NODE_54771_length_258_cov_1.167568_g54505_i0 PRJEB83711 54771 258 1.167568 3.01232544 Spirotrichea 33829 SAR_Eukaryotes SAR_Eukaryotes 477 3.2699999999999985e-130   NTclustered gi|16943682|emb|AJ310486.1| 114678 g54505 i0 100 99.984496124031 258 0 100 0 1 258 309 52 Onychodromus grandis 18S rRNA gene blastn 25796 477 1 Eukaryota Sar   Ciliophora Spirotrichea Stichotrichida Amphisiellidae Onychodromus Onychodromus grandis
17576510 17576510 PRJEB83711_P_NODE_42634_length_282_cov_6.693780_g42368_i0 PRJEB83711 42634 282 6.69378 18.8764596 Sessilida 1974272 SAR_Eukaryotes SAR_Eukaryotes 516 7.67e-142   NTclustered gi|10930|emb|X56531.1| 6026 g42368 i0 99.645 99.9964539007092 282 1 100 0 1 282 343 62 O.henneguyi small subunit ribosomal RNA gene blastn 28199 521 0.990403071017274 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Opisthonectidae Opisthonecta Opisthonecta henneguyi
20545154 20545154 PRJEB83711_P_NODE_47397_length_272_cov_1.567839_g47131_i0 PRJEB83711 47397 272 1.567839 4.26452208 Epistylis sp. 8 2979171 SAR_Eukaryotes SAR_Eukaryotes 503 5.729999999999998e-138   NTclustered gi|2304601484|gb|OP458305.1| 2979171 g47131 i0 100 95.7316176470588 272 0 100 0 1 272 1787 1516 Epistylis sp. 8 large subunit ribosomal RNA gene, partial sequence blastn 26039 503 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Epistylidae Epistylis Epistylis sp. 8
27981977 27981977 PRJEB83711_P_NODE_58525_length_253_cov_0.866667_g58259_i0 PRJEB83711 58525 253 0.866667 2.19266751 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 64.3 9.82e-10   NR CAG9325523.1 1481888 g58259 i0 48.4 2.53754940711462 62 28 73.5 1 219 34 47 104 CAG9325523.1 unnamed protein product [Blepharisma stoltei] diamond 642 64.3 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
30919204 30919204 PRJEB83711_P_NODE_67474_length_248_cov_0.891429_g67208_i0 PRJEB83711 67474 248 0.891429 2.21074392 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 47 6.26e-4   NR KRX00730.1 266149 g67208 i0 90.5 0.254032258064516 21 2 25.4 0 121 183 134 154 KRX00730.1 hypothetical protein PPERSA_02990 [Pseudocohnilembus persalinus] diamond 63 47 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;