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contig_metadata

13 rows where bioproject = "PRJEB83711", tax_clade = "FCB group" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 13 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 13 ✖

bioproject 1

  • PRJEB83711 · 13 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2694671 2694671 PRJEB83711_P_NODE_65583_length_249_cov_0.886364_g65317_i0 PRJEB83711 65583 249 0.886364 2.20704636 Fibrobacteraceae bacterium 2652288 Bacteria Bacteria 166 1.22e-46   NR MFA6624007.1 2652288 g65317 i0 100 0.987951807228916 82 0 98.8 0 2 247 330 411 MFA6624007.1 homoserine O-acetyltransferase [Fibrobacteraceae bacterium] diamond 246 166 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae   Fibrobacteraceae bacterium
10346671 10346671 PRJEB83711_P_NODE_27909_length_338_cov_1.177358_g27643_i0 PRJEB83711 27909 338 1.177358 3.97947004 Fibrobacteraceae bacterium 2652288 Bacteria Bacteria 201 6.21e-63   NR MFA6623748.1 2652288 g27643 i0 90.2 0.994082840236686 112 11 99.4 0 1 336 88 199 MFA6623748.1 DNA translocase FtsK [Fibrobacteraceae bacterium] diamond 336 201 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae   Fibrobacteraceae bacterium
18850588 18850588 PRJEB83711_P_NODE_74835_length_244_cov_0.912281_g74569_i0 PRJEB83711 74835 244 0.912281 2.22596564 Fibrobacteraceae bacterium 2652288 Bacteria Bacteria 168 2.58e-48   NR MFA6622777.1 2652288 g74569 i0 100 0.995901639344262 81 0 99.6 0 244 2 30 110 MFA6622777.1 NADH-quinone oxidoreductase subunit NuoF [Fibrobacteraceae bacterium] diamond 243 168 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae   Fibrobacteraceae bacterium
26844715 26844715 PRJEB83711_P_NODE_69501_length_247_cov_0.896552_g69235_i0 PRJEB83711 69501 247 0.896552 2.21448344 Fibrobacteraceae bacterium 2652288 Bacteria Bacteria 126 7.5099999999999985e-34   NR MFA6622827.1 2652288 g69235 i0 96.7 0.728744939271255 60 2 72.9 0 245 66 191 250 MFA6622827.1 M23 family metallopeptidase [Fibrobacteraceae bacterium] diamond 180 126 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae   Fibrobacteraceae bacterium
26970928 26970928 PRJEB83711_P_NODE_40802_length_287_cov_1.350467_g40536_i0 PRJEB83711 40802 287 1.350467 3.87584029 Fibrobacteraceae bacterium 2652288 Bacteria Bacteria 157 7.68e-46   NR MFA6623337.1 2652288 g40536 i0 87.2 0.982578397212544 94 12 98.3 0 1 282 140 233 MFA6623337.1 hypothetical protein [Fibrobacteraceae bacterium] diamond 282 157 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae   Fibrobacteraceae bacterium
27413869 27413869 PRJEB83711_P_NODE_77563_length_243_cov_0.870588_g77297_i0 PRJEB83711 77563 243 0.870588 2.11552884 Chitinispirillaceae bacterium 2813024 Bacteria Bacteria 62 5.89e-9   NR MBN1128288.1 2813024 g77297 i0 54.4 1.95061728395062 79 33 95.1 3 236 6 485 562 MBN1128288.1 hypothetical protein [Chitinispirillaceae bacterium] diamond 474 62 1 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinispirillia Chitinispirillales Chitinispirillaceae   Chitinispirillaceae bacterium
27698153 27698153 PRJEB83711_P_NODE_61084_length_251_cov_1.134831_g60818_i0 PRJEB83711 61084 251 1.134831 2.84842581 Fibrobacteraceae bacterium 2652288 Bacteria Bacteria 163 8.43e-46   NR MFA6623303.1 2652288 g60818 i0 91.6 0.99203187250996006 83 7 99.2 0 251 3 123 205 MFA6623303.1 hypothetical protein [Fibrobacteraceae bacterium] diamond 249 163 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae   Fibrobacteraceae bacterium
28645101 28645101 PRJEB83711_P_NODE_60367_length_252_cov_0.871508_g60101_i0 PRJEB83711 60367 252 0.871508 2.19620016 Fibrobacteraceae bacterium 2652288 Bacteria Bacteria 127 3.03e-33   NR MCK9181761.1 2652288 g60101 i0 72.8 0.964285714285714 81 22 96.4 0 251 9 225 305 MCK9181761.1 hypothetical protein [Fibrobacteraceae bacterium] diamond 243 127 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae   Fibrobacteraceae bacterium
28858548 28858548 PRJEB83711_P_NODE_63528_length_250_cov_0.881356_g63262_i0 PRJEB83711 63528 250 0.881356 2.20339 Pseudomonadati 3379134 Bacteria Bacteria 76.6 4.73e-14   NR MBR2091580.1 35828 g63262 i0 55.9 1.356 59 26 70.8 0 177 1 2 60 MBR2091580.1 DUF262 domain-containing protein [Fibrobacter sp.] diamond 339 77 0.994805194805195 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter sp.
31488294 31488294 PRJEB83711_P_NODE_63796_length_250_cov_0.881356_g63530_i0 PRJEB83711 63796 250 0.881356 2.20339 Fibrobacter sp. 35828 Bacteria Bacteria 55.1 4.29e-7   NR MDY6285683.1 35828 g63530 i0 62.5 0.48 40 15 48 0 129 248 1 40 MDY6285683.1 GtrA family protein [Fibrobacter sp.] diamond 120 55.1 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter sp.
32025861 32025861 PRJEB83711_P_NODE_41598_length_285_cov_1.367925_g41332_i0 PRJEB83711 41598 285 1.367925 3.89858625 Fibrobacteraceae bacterium 2652288 Bacteria Bacteria 181 1.81e-53   NR MFA6623028.1 2652288 g41332 i0 95.7 0.989473684210526 94 4 98.9 0 3 284 79 172 MFA6623028.1 penicillin-binding transpeptidase domain-containing protein [Fibrobacteraceae bacterium] diamond 282 181 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae   Fibrobacteraceae bacterium
32342461 32342461 PRJEB83711_P_NODE_30319_length_326_cov_0.924901_g30053_i0 PRJEB83711 30319 326 0.924901 3.01517726 Fibrobacter succinogenes 833 Bacteria Bacteria 43.5 0.0492   NR WP_014545723.1 833 g30053 i0 33.8 0.680981595092024 74 45 67.2 2 221 3 352 422 WP_014545723.1 O-antigen polymerase [Fibrobacter succinogenes] diamond 222 43.5 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter succinogenes
32563963 32563963 PRJEB83711_P_NODE_59739_length_252_cov_0.871508_g59473_i0 PRJEB83711 59739 252 0.871508 2.19620016 Fibrobacteraceae bacterium 2652288 Bacteria Bacteria 149 3.909999999999999e-41   NR MFA6622806.1 2652288 g59473 i0 92.9 1 84 6 100 0 252 1 46 129 MFA6622806.1 ABC transporter permease [Fibrobacteraceae bacterium] diamond 252 149 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae   Fibrobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;