RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB83711", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Parcubacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJEB83711 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28360666 28360666 PRJEB83711_P_NODE_44226_length_279_cov_1.368932_g43960_i0 PRJEB83711 44226 279 1.368932 3.81932028 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 47 5.7e-4   NR MBC7766380.1 2762014 g43960 i0 31.6 0.849462365591398 79 53 84.9 1 41 277 24 101 MBC7766380.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 237 47 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
32025862 32025862 PRJEB83711_P_NODE_47378_length_272_cov_1.567839_g47112_i0 PRJEB83711 47378 272 1.567839 4.26452208 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 164 3.35e-45   NR BFD25251.1 2762014 g47112 i0 88.9 0.992647058823529 90 10 99.3 0 3 272 237 326 BFD25251.1 MAG: O-antigen ligase family protein [Candidatus Parcubacteria bacterium] diamond 270 164 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;