RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB83711", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJEB83711 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28321844 28321844 PRJEB83711_P_NODE_43326_length_281_cov_1.322115_g43060_i0 PRJEB83711 43326 281 1.322115 3.71514315 Bacteria 2 Bacteria Bacteria 85.5 4.15e-17   NR MEA2657503.1 2528255 g43060 i0 72.9 1.25978647686833 59 16 63 0 104 280 1 59 MEA2657503.1 3-deoxy-D-manno-octulosonic-acid transferase [Candidatus Binatota bacterium] diamond 354 85.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota         Candidatus Binatota bacterium
28582005 28582005 PRJEB83711_P_NODE_74247_length_244_cov_0.912281_g73981_i0 PRJEB83711 74247 244 0.912281 2.22596564 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 152 2.94e-42   NR HET9297301.1 2838779 g73981 i0 95.1 4.97950819672131 81 4 99.6 0 243 1 150 230 HET9297301.1 ABC-F family ATP-binding cassette domain-containing protein [Candidatus Binatia bacterium] diamond 1215 152 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;