RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB83101", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Negarnaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJEB83101 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3968315 3968315 PRJEB83101_P_NODE_50684_length_275_cov_1.301980_g50379_i0 PRJEB83101 50684 275 1.30198 3.580445 Sesamum betacytorhabdovirus 1_Cat 3078362 Viruses Viruses 479 9.78e-131   NTclustered gi|2618835764|tpg|BK064337.1| 3078362 g50379 i0 98.175 1.99272727272727 274 5 99 0 1 274 5125 5398 TPA_asm: Sesamum betacytorhabdovirus 1_Cat cRNA sequence blastn 548 479 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Sesamum betacytorhabdovirus 1_Cat
19266749 19266749 PRJEB83101_P_NODE_19476_length_420_cov_1.737752_g19173_i0 PRJEB83101 19476 420 1.737752 7.2985584 Alphanucleorhabdovirus morogoromaydis 2734367 Viruses Viruses 403 9.69e-108   NTclustered gi|1547070460|gb|MK112501.2| 2497337 g19173 i0 84.135 0.990476190476191 416 66 99 0 3 418 2418 2003 Morogoro maize-associated virus isolate 16-0121 nucleocapsid protein, phosphoprotein, putative movement protein, matrix protein, glycoprotein, and RNA-dependent RNA polymerase genes, complete cds blastn 416 403 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Alphanucleorhabdovirus Alphanucleorhabdovirus morogoromaydis
26749004 26749004 PRJEB83101_P_NODE_41121_length_292_cov_1.780822_g40816_i0 PRJEB83101 41121 292 1.780822 5.20000024 Morogoro maize-associated virus 2497337 Viruses Viruses 171 1.32e-50   NR QYU75380.1 2497337 g40816 i0 83.5 0.996575342465753 97 16 99.7 0 292 2 159 255 QYU75380.1 putative movement protein [Morogoro maize-associated virus] diamond 291 171 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Alphanucleorhabdovirus Alphanucleorhabdovirus morogoromaydis
27698128 27698128 PRJEB83101_P_NODE_43724_length_287_cov_1.635514_g43419_i0 PRJEB83101 43724 287 1.635514 4.69392518 Morogoro maize-associated virus 2497337 Viruses Viruses 108 1.01e-26   NR YP_010087199.1 2497337 g43419 i0 94.4 0.564459930313589 54 3 56.4 0 285 124 181 234 YP_010087199.1 matrix protein [Morogoro maize-associated virus] diamond 162 108 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Alphanucleorhabdovirus Alphanucleorhabdovirus morogoromaydis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;