RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB83101" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB83101 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4826110 4826110 PRJEB83101_P_NODE_59704_length_260_cov_2.497326_g59399_i0 PRJEB83101 59704 260 2.497326 6.4930476 Minisyncoccota bacterium 2053589 Bacteria Bacteria 73.6 6.53e-13   NR HEV3245287.1 2053589 g59399 i0 62.5 0.553846153846154 48 18 55.4 0 16 159 42 89 HEV3245287.1 FG-GAP-like repeat-containing protein [Candidatus Paceibacterota bacterium] diamond 144 73.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
26844685 26844685 PRJEB83101_P_NODE_44601_length_286_cov_1.014085_g44296_i0 PRJEB83101 44601 286 1.014085 2.9002831 Minisyncoccota bacterium 2053589 Bacteria Bacteria 48.1 4.87e-4   NR HEY9481221.1 2053589 g44296 i0 75 0.293706293706294 28 7 29.4 0 53 136 170 197 HEY9481221.1 ribonuclease HII [Candidatus Paceibacterota bacterium] diamond 84 48.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27508484 27508484 PRJEB83101_P_NODE_76923_length_247_cov_0.896552_g76618_i0 PRJEB83101 76923 247 0.896552 2.21448344 Minisyncoccota bacterium 2053589 Bacteria Bacteria 72 1.93e-12   NR MFA7285894.1 2053589 g76618 i0 50 1.89473684210526 78 39 94.7 0 14 247 323 400 MFA7285894.1 Ig-like domain-containing protein [Candidatus Paceibacterota bacterium] diamond 468 72 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28960979 28960979 PRJEB83101_P_NODE_46768_length_282_cov_1.119617_g46463_i0 PRJEB83101 46768 282 1.119617 3.15731994 Minisyncoccota bacterium 2053589 Bacteria Bacteria 78.6 1.52e-14   NR MEZ0209062.1 2053589 g46463 i0 58.9 0.776595744680851 73 30 77.7 0 3 221 132 204 MEZ0209062.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 219 78.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;