RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB83101", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB83101 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28171317 28171317 PRJEB83101_P_NODE_43686_length_287_cov_1.822430_g43381_i0 PRJEB83101 43686 287 1.82243 5.2303741 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 90.5 7.26e-19   NR XP_001022895.3 312017 g43381 i0 42.1 0.993031358885017 95 55 99.3 0 286 2 329 423 XP_001022895.3 26S proteasome non-ATPase regulatory subunit [Tetrahymena thermophila SB210] diamond 285 90.5 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
29143069 29143069 PRJEB83101_P_NODE_53449_length_270_cov_1.807107_g53144_i0 PRJEB83101 53449 270 1.807107 4.8791889 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 143 1.4299999999999998e-37   NR KAL4453968.1 5901 g53144 i0 74.4 6.97777777777778 90 23 100 0 1 270 401 490 KAL4453968.1 hypothetical protein ABPG74_003851 [Tetrahymena malaccensis] diamond 1884 143 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena malaccensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;