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contig_metadata

23 rows where bioproject = "PRJEB83101", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 23 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 23 ✖

bioproject 1

  • PRJEB83101 · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3968324 3968324 PRJEB83101_P_NODE_50924_length_274_cov_2.522388_g50619_i0 PRJEB83101 50924 274 2.522388 6.91134312 Akkermansiaceae bacterium 2562705 Bacteria Bacteria 198 3.0499999999999998e-46   NTclustered gi|2022020957|gb|CP059069.1| 2562705 g50619 i0 82.051 2.56569343065693 234 40 85 2 41 273 3204414 3204646 Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome blastn 703 198 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae   Akkermansiaceae bacterium
6520204 6520204 PRJEB83101_P_NODE_44906_length_285_cov_1.471698_g44601_i0 PRJEB83101 44906 285 1.471698 4.1943393 Terrimicrobiaceae bacterium 2832348 Bacteria Bacteria 114 3.55e-29   NR HRJ72192.1 2832348 g44601 i0 62.4 0.978947368421053 93 35 97.9 0 282 4 2 94 HRJ72192.1 DNA alkylation repair protein [Terrimicrobiaceae bacterium] diamond 279 114 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Terrimicrobiia Terrimicrobiales Terrimicrobiaceae   Terrimicrobiaceae bacterium
10345337 10345337 PRJEB83101_P_NODE_58109_length_263_cov_1.305263_g57804_i0 PRJEB83101 58109 263 1.305263 3.43284169 Horticoccus luteus 2862869 Bacteria Bacteria 213 1.04e-50   NTclustered gi|2077391884|gb|CP080507.1| 2862869 g57804 i0 81.369 100.752851711027 263 47 99 2 2 263 2127162 2126901 Horticoccus luteus strain KSB-15 chromosome, complete genome blastn 26498 213 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Horticoccus Horticoccus luteus
19268478 19268478 PRJEB83101_P_NODE_82156_length_244_cov_0.912281_g81851_i0 PRJEB83101 82156 244 0.912281 2.22596564 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 58.4 4.73e-4   NTclustered gi|2874254096|emb|OY970179.1| 412056 g81851 i0 90.909 1.02049180327869 44 3 18 1 186 229 670107 670149 MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 blastn 249 58.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
23094673 23094673 PRJEB83101_P_NODE_68679_length_251_cov_0.876404_g68374_i0 PRJEB83101 68679 251 0.876404 2.19977404 Luteolibacter sp. SL250 2995170 Bacteria Bacteria 353 5.569999999999998e-93   NTclustered gi|2381117106|gb|CP113054.1| 2995170 g68374 i0 92.032 1 251 20 100 0 1 251 2801644 2801394 Luteolibacter sp. SL250 chromosome blastn 251 353 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. SL250
27603218 27603218 PRJEB83101_P_NODE_83704_length_243_cov_0.917647_g83399_i0 PRJEB83101 83704 243 0.917647 2.22988221 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 131 2.15e-37   NR MFO1488687.1 2026799 g83399 i0 80 5.92592592592593 80 15 98.8 1 242 3 33 111 MFO1488687.1 DUF6573 family protein [Verrucomicrobiota bacterium] diamond 1440 131 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28455704 28455704 PRJEB83101_P_NODE_70086_length_250_cov_1.480226_g69781_i0 PRJEB83101 70086 250 1.480226 3.700565 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 155 6.7e-42   NR MEP6663575.1 2026799 g69781 i0 81.7 0.984 82 15 98.4 0 248 3 448 529 MEP6663575.1 DEAD/DEAH box helicase [Verrucomicrobiota bacterium] diamond 246 155 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29181925 29181925 PRJEB83101_P_NODE_86389_length_242_cov_0.923077_g86084_i0 PRJEB83101 86389 242 0.923077 2.23384634 Opitutaceae bacterium 2006848 Bacteria Bacteria 49.3 1.78e-4   NR HWZ94845.1 2006848 g86084 i0 43.2 0.545454545454545 44 25 54.5 0 133 2 220 263 HWZ94845.1 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase [Opitutaceae bacterium] diamond 132 49.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
30128789 30128789 PRJEB83101_P_NODE_77672_length_246_cov_1.560694_g77367_i0 PRJEB83101 77672 246 1.560694 3.83930724 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 43.5 0.0106   NR MBP7948463.1 2026801 g77367 i0 45.7 1.34146341463415 46 25 56.1 0 45 182 97 142 MBP7948463.1 hypothetical protein [Verrucomicrobiales bacterium] diamond 330 43.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
30184875 30184875 PRJEB83101_P_NODE_48492_length_279_cov_0.980583_g48187_i0 PRJEB83101 48492 279 0.980583 2.73582657 Bacteria 2 Bacteria Bacteria 116 4.57e-28   NR MCL4181614.1 2026799 g48187 i0 57.6 4.89247311827957 92 39 98.9 0 1 276 399 490 MCL4181614.1 DUF4965 domain-containing protein [Verrucomicrobiota bacterium] diamond 1365 116 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30413762 30413762 PRJEB83101_P_NODE_65813_length_253_cov_0.866667_g65508_i0 PRJEB83101 65813 253 0.866667 2.19266751 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 117 4.5999999999999996e-32   NR MBS0585245.1 2026799 g65508 i0 86.7 0.889328063241107 75 10 88.9 0 253 29 17 91 MBS0585245.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 225 117 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30950790 30950790 PRJEB83101_P_NODE_78674_length_246_cov_0.901734_g78369_i0 PRJEB83101 78674 246 0.901734 2.21826564 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 140 1.19e-39   NR MEY4201227.1 2026799 g78369 i0 97.2 0.865853658536585 71 2 86.6 0 33 245 122 192 MEY4201227.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 213 140 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31488284 31488284 PRJEB83101_P_NODE_80356_length_245_cov_0.906977_g80051_i0 PRJEB83101 80356 245 0.906977 2.22209365 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 69.3 1.01e-12   NR MDB6059734.1 2026801 g80051 i0 78.4 0.453061224489796 37 8 45.3 0 244 134 105 141 MDB6059734.1 hypothetical protein [Verrucomicrobiales bacterium] diamond 111 69.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
31519809 31519809 PRJEB83101_P_NODE_57096_length_264_cov_2.198953_g56791_i0 PRJEB83101 57096 264 2.198953 5.80523592 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 44.7 0.00984   NR MEY3479740.1 2026799 g56791 i0 34.8 0.784090909090909 69 42 75 1 46 243 5 73 MEY3479740.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 207 44.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31740921 31740921 PRJEB83101_P_NODE_44877_length_285_cov_1.471698_g44572_i0 PRJEB83101 44877 285 1.471698 4.1943393 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 49.3 2.66e-4   NR HEV7401287.1 2811408 g44572 i0 81.5 0.284210526315789 27 5 28.4 0 204 284 1 27 HEV7401287.1 acetylglutamate kinase [Chthoniobacteraceae bacterium] diamond 81 49.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium
31930763 31930763 PRJEB83101_P_NODE_68717_length_251_cov_0.876404_g68412_i0 PRJEB83101 68717 251 0.876404 2.19977404 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 79.3 1.05e-15   NR MDB6059034.1 2026801 g68412 i0 77.4 0.633466135458167 53 12 63.3 0 8 166 96 148 MDB6059034.1 putative rane protein [Verrucomicrobiales bacterium] diamond 159 79.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
31962470 31962470 PRJEB83101_P_NODE_80378_length_245_cov_0.906977_g80073_i0 PRJEB83101 80378 245 0.906977 2.22209365 Luteolibacter sp. 1962973 Bacteria Bacteria 93.6 3.850000000000001e-21   NR HVJ47147.1 1962973 g80073 i0 65.4 0.991836734693878 81 23 94.3 3 5 235 166 245 HVJ47147.1 hypothetical protein [Luteolibacter sp.] diamond 243 93.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp.
32373985 32373985 PRJEB83101_P_NODE_61699_length_257_cov_2.135870_g61394_i0 PRJEB83101 61699 257 2.13587 5.4891859 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 52.8 1.3e-5   NR MFH1476185.1 2026799 g61394 i0 68.6 0.852140077821012 35 11 40.9 0 107 3 5 39 MFH1476185.1 NAD(+) synthase [Verrucomicrobiota bacterium] diamond 219 52.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32398251 32398251 PRJEB83101_P_NODE_61919_length_257_cov_1.597826_g61614_i0 PRJEB83101 61919 257 1.597826 4.10641282 Verrucomicrobiota 74201 Bacteria Bacteria 61.6 6.3e-9   NR HAV65483.1 2026801 g61614 i0 45.6 3.65369649805447 68 36 79.4 1 49 252 117 183 HAV65483.1 prephenate dehydrogenase/arogenate dehydrogenase family protein [Verrucomicrobiales bacterium] diamond 939 61.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
32405566 32405566 PRJEB83101_P_NODE_40659_length_293_cov_2.468182_g40354_i0 PRJEB83101 40659 293 2.468182 7.23177326 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 42 0.0303   NR MED5278845.1 2026799 g40354 i0 34.6 0.532423208191126 52 34 53.2 0 61 216 37 88 MED5278845.1 sugar phosphate isomerase/epimerase [Verrucomicrobiota bacterium] diamond 156 42 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32437388 32437388 PRJEB83101_P_NODE_54959_length_268_cov_1.261538_g54654_i0 PRJEB83101 54959 268 1.261538 3.38092184 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 108 9.72e-26   NR MFO1501623.1 2026799 g54654 i0 79.4 0.761194029850746 68 14 76.1 0 266 63 325 392 MFO1501623.1 MFS transporter [Verrucomicrobiota bacterium] diamond 204 108 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32469011 32469011 PRJEB83101_P_NODE_89039_length_233_cov_2.393750_g88734_i0 PRJEB83101 89039 233 2.39375 5.5774375 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 47.8 5.47e-4   NR MEI7954406.1 2026799 g88734 i0 51.3 0.502145922746781 39 19 50.2 0 173 57 405 443 MEI7954406.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 117 47.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32689529 32689529 PRJEB83101_P_NODE_69160_length_251_cov_0.876404_g68855_i0 PRJEB83101 69160 251 0.876404 2.19977404 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 99 1.36e-23   NR MCX6883943.1 2026799 g68855 i0 74.2 5.12749003984064 62 16 74.1 0 2 187 144 205 MCX6883943.1 phosphoribosylanthranilate isomerase [Verrucomicrobiota bacterium] diamond 1287 99 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;