RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB83101", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJEB83101 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20124128 20124128 PRJEB83101_P_NODE_20056_length_413_cov_2.085294_g19753_i0 PRJEB83101 20056 413 2.085294 8.61226422 Fungi 4751 Fungi Fungi 763 0   NTclustered gi|62361829|gb|AY882560.1| 27381 g19753 i0 100 26.0096852300242 413 0 100 0 1 413 479 891 Glomus mosseae putative amino acid permease mRNA, complete cds blastn 10742 763 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Funneliformis Funneliformis mosseae
26654173 26654173 PRJEB83101_P_NODE_84041_length_243_cov_0.917647_g83736_i0 PRJEB83101 84041 243 0.917647 2.22988221 Linnemannia elongata 310910 Fungi Fungi 93.2 6.36e-20   NR KAF9282527.1 310910 g83736 i0 63.4 3.46913580246914 71 26 87.7 0 31 243 1 71 KAF9282527.1 hypothetical protein BGZ88_010989 [Linnemannia elongata] diamond 843 93.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Linnemannia Linnemannia elongata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;