RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB83101", tax_clade = "Opisthokonta" and tax_phylum = "Microsporidia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJEB83101 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2691741 2691741 PRJEB83101_P_NODE_3323_length_1124_cov_11.586108_g3131_i0 PRJEB83101 3323 1124 11.586108 130.22785392 Pleistophora mulleri 249366 Fungi Fungi 1166 0   NTclustered gi|134147422|gb|EF119339.1| 249366 g3131 i0 85.689 48.9350533807829 1125 134 98 19 6 1111 1363 2479 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 55003 1166 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
3969398 3969398 PRJEB83101_P_NODE_91224_length_210_cov_96.058394_g90919_i0 PRJEB83101 91224 210 96.058394 201.7226274 Fusasporis stethaprioni 2777717 Fungi Fungi 326 9.83e-85   NTclustered gi|1914073495|gb|MW077214.1| 2777717 g90919 i0 94.811 99.6714285714286 212 6 99 4 1 208 1027 1237 Fusasporis stethaprioni strain 2018 small subunit ribosomal RNA gene, partial sequence blastn 20931 326 1 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Fusasporis Fusasporis stethaprioni
31638697 31638697 PRJEB83101_P_NODE_73336_length_249_cov_0.875000_g73031_i0 PRJEB83101 73336 249 0.875 2.17875 Pleistophoridae 35232 Fungi Fungi 43.5 0.0209   NR ELQ75619.1 72359 g73031 i0 31 2.02409638554217 84 53 98.8 3 247 2 146 226 ELQ75619.1 Chaperonin complex component, TCP-1 delta subunit (CCT4) [Trachipleistophora hominis] diamond 504 43.5 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Trachipleistophora Trachipleistophora hominis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;