contig_metadata
8 rows where bioproject = "PRJEB82358" and tax_phylum = "Acidobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17992332 | 17992332 | PRJEB82358_P_NODE_17495_length_247_cov_1.379310_g17484_i0 | PRJEB82358 | 17495 | 247 | 1.37931 | 3.4068957 | uncultured Thermoanaerobaculia bacterium | 3036248 | Bacteria | Bacteria | 174 | 4.57e-39 | NTclustered | gi|2518540615|emb|OX638294.1| | 3036248 | g17484 | i0 | 86.25 | 40.7692307692308 | 160 | 22 | 65 | 0 | 87 | 246 | 667249 | 667408 | MAG: uncultured Thermoanaerobaculia bacterium isolate 42478a12-5572-4d71-959b-92ffd854a98d genome assembly, chromosome: 1 | blastn | 10070 | 174 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Thermoanaerobaculia | uncultured Thermoanaerobaculia bacterium | |||||
| 20541782 | 20541782 | PRJEB82358_P_NODE_20157_length_232_cov_2.446541_g20146_i0 | PRJEB82358 | 20157 | 232 | 2.446541 | 5.67597512 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 300 | 6.71e-77 | NTclustered | gi|2621707050|emb|OY764903.1| | 2212468 | g20146 | i0 | 93.137 | 55.2327586206897 | 204 | 14 | 88 | 0 | 24 | 227 | 3557229 | 3557026 | MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 | blastn | 12814 | 300 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 26741682 | 26741682 | PRJEB82358_P_NODE_15241_length_261_cov_3.563830_g15230_i0 | PRJEB82358 | 15241 | 261 | 3.56383 | 9.3015963 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 98.6 | 5.779999999999999e-23 | NR | MDQ2945430.1 | 1978231 | g15230 | i0 | 55.2 | 1.94252873563218 | 87 | 39 | 100 | 0 | 1 | 261 | 5 | 91 | MDQ2945430.1 IS21-like element helper ATPase IstB [Acidobacteriota bacterium] | diamond | 507 | 98.6 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 26900507 | 26900507 | PRJEB82358_P_NODE_23621_length_199_cov_7.396825_g23610_i0 | PRJEB82358 | 23621 | 199 | 7.396825 | 14.71968175 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 102 | 1.8299999999999994e-23 | NR | MCX6597616.1 | 1978231 | g23610 | i0 | 84.2 | 6.96482412060301 | 57 | 9 | 85.9 | 0 | 3 | 173 | 254 | 310 | MCX6597616.1 glycosyltransferase [Acidobacteriota bacterium] | diamond | 1386 | 102 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 27571419 | 27571419 | PRJEB82358_P_NODE_17944_length_245_cov_1.494186_g17933_i0 | PRJEB82358 | 17944 | 245 | 1.494186 | 3.6607557 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 62 | 6.24e-9 | NR | HEV8039869.1 | 2212468 | g17933 | i0 | 47.5 | 0.979591836734694 | 80 | 36 | 95.5 | 4 | 2 | 235 | 813 | 888 | HEV8039869.1 trypsin-like peptidase domain-containing protein [Bryobacteraceae bacterium] | diamond | 240 | 62 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 28739700 | 28739700 | PRJEB82358_P_NODE_13087_length_279_cov_1.364078_g13076_i0 | PRJEB82358 | 13087 | 279 | 1.364078 | 3.80577762 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 63.5 | 1.76e-9 | NR | HEX7330309.1 | 2283092 | g13076 | i0 | 44.3 | 0.752688172043011 | 70 | 39 | 75.3 | 0 | 236 | 27 | 119 | 188 | HEX7330309.1 hypothetical protein [Pyrinomonadaceae bacterium] | diamond | 210 | 63.5 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 30002872 | 30002872 | PRJEB82358_P_NODE_13371_length_276_cov_2.921182_g13360_i0 | PRJEB82358 | 13371 | 276 | 2.921182 | 8.06246232 | Candidatus Acidiferrum sp. | 3069120 | Bacteria | Bacteria | 57.4 | 2e-8 | NR | HXN74906.1 | 3069120 | g13360 | i0 | 51.9 | 0.58695652173913 | 54 | 26 | 58.7 | 0 | 207 | 46 | 25 | 78 | HXN74906.1 hypothetical protein [Candidatus Acidiferrum sp.] | diamond | 162 | 57.4 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Candidatus Acidiferrales | Candidatus Acidiferrum | Candidatus Acidiferrum sp. | |||
| 31772601 | 31772601 | PRJEB82358_P_NODE_18677_length_241_cov_6.178571_g18666_i0 | PRJEB82358 | 18677 | 241 | 6.178571 | 14.89035611 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 91.3 | 7.45e-21 | NR | PYT21880.1 | 1978231 | g18666 | i0 | 75 | 0.697095435684647 | 56 | 14 | 69.7 | 0 | 2 | 169 | 131 | 186 | PYT21880.1 MAG: hypothetical protein DMG57_37270 [Acidobacteriota bacterium] | diamond | 168 | 91.3 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;