RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

467 rows where bioproject = "PRJEB82358" and tax_kingdom = "Pseudomonadati"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Pseudomonadati · 467 ✖

bioproject 1

  • PRJEB82358 · 467 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
140774 140774 PRJEB82358_P_NODE_13181_length_278_cov_1.858537_g13170_i0 PRJEB82358 13181 278 1.858537 5.16673286 Bradyrhizobium sp. 186 2782654 Bacteria Bacteria 353 6.26e-93   NTclustered gi|2230168037|gb|CP082164.1| 2782654 g13170 i0 90.602 95.410071942446 266 25 96 0 13 278 5024947 5024682 Bradyrhizobium sp. 186 chromosome, complete genome blastn 26524 353 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. 186
140777 140777 PRJEB82358_P_NODE_13401_length_276_cov_1.517241_g13390_i0 PRJEB82358 13401 276 1.517241 4.18758516 Flavihumibacter rivuli 2838156 Bacteria Bacteria 220 6.57e-53   NTclustered gi|2198890466|gb|CP092334.1| 2838156 g13390 i0 81.992 0.945652173913043 261 45 94 2 1 260 1144246 1144505 Flavihumibacter rivuli strain IMCC34838 chromosome, complete genome blastn 261 220 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Flavihumibacter Flavihumibacter rivuli
140786 140786 PRJEB82358_P_NODE_14381_length_268_cov_1.620513_g14370_i0 PRJEB82358 14381 268 1.620513 4.34297484 Rheinheimera sp. MM224 3019969 Bacteria Bacteria 309 1.32e-79   NTclustered gi|2321869226|emb|OX352320.1| 3019969 g14370 i0 90.598 8.05223880597015 234 21 87 1 14 247 3171000 3170768 Rheinheimera sp. isolate Rheinheimera MM224 assembly genome assembly, chromosome: MM224 blastn 2158 309 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera sp. MM224
140794 140794 PRJEB82358_P_NODE_15501_length_259_cov_3.806452_g15490_i0 PRJEB82358 15501 259 3.806452 9.85871068 Burkholderia multivorans 87883 Bacteria Bacteria 58.4 5.07e-4   NTclustered gi|2239214075|gb|CP090747.1| 87883 g15490 i0 97.143 7.12741312741313 35 0 14 1 25 59 432645 432678 Burkholderia multivorans strain 2010Ycf503 chromosome 1, complete sequence blastn 1846 58.4 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia multivorans
140799 140799 PRJEB82358_P_NODE_16221_length_254_cov_1.784530_g16210_i0 PRJEB82358 16221 254 1.78453 4.5327062 Candidatus Manganitrophus sp. 2927580 Bacteria Bacteria 176 1.31e-39   NTclustered gi|2449738114|gb|CP114561.1| 2927580 g16210 i0 80.08 75.0236220472441 251 38 96 11 10 254 3416475 3416719 MAG: Candidatus Manganitrophus sp. isolate GAC4 chromosome, complete genome blastn 19056 176 1 Bacteria   Pseudomonadati Nitrospirota Nitrospiria Candidatus Troglogloeales Candidatus Manganitrophaceae Candidatus Manganitrophus Candidatus Manganitrophus sp.
140809 140809 PRJEB82358_P_NODE_17481_length_247_cov_1.747126_g17470_i0 PRJEB82358 17481 247 1.747126 4.31540122 Rheinheimera mangrovi 2498451 Bacteria Bacteria 207 4.4999999999999994e-49   NTclustered gi|1546439273|gb|CP034683.1| 2498451 g17470 i0 85.427 0.805668016194332 199 29 81 0 1 199 4234845 4234647 Rheinheimera mangrovi strain LHK132 chromosome, complete genome blastn 199 207 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera mangrovi
140829 140829 PRJEB82358_P_NODE_20341_length_231_cov_2.094937_g20330_i0 PRJEB82358 20341 231 2.094937 4.83930447 Vibrio furnissii 29494 Bacteria Bacteria 331 2.37e-86   NTclustered gi|1776325540|gb|CP035696.1| 29494 g20330 i0 93.722 3.83549783549784 223 10 96 3 1 221 876290 876510 Vibrio furnissii strain 2419-04 chromosome 1, complete sequence blastn 886 331 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales Vibrionaceae Vibrio Vibrio furnissii
140907 140907 PRJEB82358_P_NODE_5221_length_411_cov_4.402367_g5210_i0 PRJEB82358 5221 411 4.402367 18.09372837 Flavobacterium dauae 1563479 Bacteria Bacteria 56.5 0.003   NTclustered gi|2557430891|gb|CP130821.1| 1563479 g5210 i0 100 0.072992700729927 30 0 7 0 122 151 1161438 1161409 Flavobacterium dauae strain TCH3-2 chromosome, complete genome blastn 30 56.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium dauae
997455 997455 PRJEB82358_P_NODE_8921_length_330_cov_2.941634_g8910_i0 PRJEB82358 8921 330 2.941634 9.7073922 Halomonas 2745 Bacteria Bacteria 54.7 0.009   NTclustered gi|1839539129|gb|CP053025.1| 2730357 g8910 i0 94.444 0.327272727272727 36 1 11 1 286 320 958932 958967 Halomonas sp. PA5 chromosome blastn 108 54.7 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Oceanospirillales Halomonadaceae Halomonas Halomonas sp. PA5
1415360 1415360 PRJEB82358_P_NODE_12562_length_284_cov_1.132701_g12551_i0 PRJEB82358 12562 284 1.132701 3.21687084 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 132 1.35e-36   NR HEY8279025.1 3034175 g12551 i0 72.8 0.971830985915493 92 24 97.2 1 2 277 83 173 HEY8279025.1 ABC transporter substrate-binding protein [Bdellovibrionota bacterium] diamond 276 132 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
1415402 1415402 PRJEB82358_P_NODE_17482_length_247_cov_1.735632_g17471_i0 PRJEB82358 17482 247 1.735632 4.28701104 Rheinheimera mangrovi 2498451 Bacteria Bacteria 250 7.38e-62   NTclustered gi|1546439273|gb|CP034683.1| 2498451 g17471 i0 84.959 1.9919028340081 246 37 99 0 2 247 4363067 4362822 Rheinheimera mangrovi strain LHK132 chromosome, complete genome blastn 492 250 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera mangrovi
1415416 1415416 PRJEB82358_P_NODE_19842_length_234_cov_2.354037_g19831_i0 PRJEB82358 19842 234 2.354037 5.50844658 Rheinheimera mangrovi 2498451 Bacteria Bacteria 375 1.0899999999999998e-99   NTclustered gi|1546439273|gb|CP034683.1| 2498451 g19831 i0 96.491 1.95299145299145 228 7 97 1 8 234 1386176 1386403 Rheinheimera mangrovi strain LHK132 chromosome, complete genome blastn 457 375 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera mangrovi
1415418 1415418 PRJEB82358_P_NODE_19982_length_233_cov_2.531250_g19971_i0 PRJEB82358 19982 233 2.53125 5.8978125 Pseudomonas qingdaonensis 2056231 Bacteria Bacteria 398 2.32e-106   NTclustered gi|2041110096|gb|CP074676.1| 2056231 g19971 i0 100 93.0643776824034 215 0 92 0 1 215 581245 581031 Pseudomonas qingdaonensis strain S-1 chromosome, complete genome blastn 21684 398 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas qingdaonensis
1415441 1415441 PRJEB82358_P_NODE_23662_length_199_cov_5.071429_g23651_i0 PRJEB82358 23662 199 5.071429 10.09214371 Rheinheimera sp. SA_1 1827365 Bacteria Bacteria 139 1.29e-36   NR OBP16981.1 1827365 g23651 i0 96.9 1.92964824120603 64 2 96.5 0 199 8 427 490 OBP16981.1 alpha-mannosidase [Rheinheimera sp. SA_1] diamond 384 139 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera sp. SA_1
1415444 1415444 PRJEB82358_P_NODE_24042_length_196_cov_4.382114_g24031_i0 PRJEB82358 24042 196 4.382114 8.58894344 Rheinheimera sp. MM224 3019969 Bacteria Bacteria 270 4.299999999999999e-68   NTclustered gi|2321869226|emb|OX352320.1| 3019969 g24031 i0 94.318 1.79591836734694 176 10 90 0 1 176 3683149 3682974 Rheinheimera sp. isolate Rheinheimera MM224 assembly genome assembly, chromosome: MM224 blastn 352 270 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera sp. MM224
2272601 2272601 PRJEB82358_P_NODE_16522_length_252_cov_1.653631_g16511_i0 PRJEB82358 16522 252 1.653631 4.16715012 Burkholderia 32008 Bacteria Bacteria 466 6.89e-127   NTclustered gi|2015257188|gb|CP071829.1| 179879 g16511 i0 100 27 252 0 100 0 1 252 5508 5759 Burkholderia anthina strain 1CH1 plasmid unnamed5, complete sequence blastn 6804 466 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia anthina
2272603 2272603 PRJEB82358_P_NODE_17282_length_248_cov_1.560000_g17271_i0 PRJEB82358 17282 248 1.56 3.8688 Weeksellaceae 2762318 Bacteria Bacteria 398 2.5e-106   NTclustered gi|1919297446|gb|CP063145.1| 1118202 g17271 i0 99.541 34.2822580645161 218 1 88 0 1 218 305491 305274 Cruoricaptor ignavus strain M1214 chromosome, complete genome blastn 8502 398 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Cruoricaptor Cruoricaptor ignavus
2272605 2272605 PRJEB82358_P_NODE_18222_length_244_cov_0.900585_g18211_i0 PRJEB82358 18222 244 0.900585 2.1974274 Haemophilus 724 Bacteria Bacteria 433 6.73e-117   NTclustered gi|1948568257|gb|CP065991.1| 729 g18211 i0 100 22.9303278688525 234 0 96 0 1 234 1669262 1669495 Haemophilus parainfluenzae strain FDAARGOS_1000 chromosome, complete genome blastn 5595 433 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus Haemophilus parainfluenzae
2690850 2690850 PRJEB82358_P_NODE_14063_length_270_cov_3.629442_g14052_i0 PRJEB82358 14063 270 3.629442 9.7994934 Lacibacter sp. MH-610 3020883 Bacteria Bacteria 239 1.7700000000000002e-58   NTclustered gi|2865359271|gb|CP116002.1| 3020883 g14052 i0 93.789 0.596296296296296 161 7 59 3 67 225 1613880 1614039 Lacibacter sp. MH-610 chromosome blastn 161 239 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Lacibacter Lacibacter sp. MH-610
2690851 2690851 PRJEB82358_P_NODE_14123_length_270_cov_1.730964_g14112_i0 PRJEB82358 14123 270 1.730964 4.6736028 root 1 Root_unresolved Root_unresolved 84 5.84e-18   NR WP_187069234.1 28901 g14112 i0 78 18.3333333333333 50 11 55.6 0 178 29 118 167 WP_187069234.1 reverse transcriptase family protein, partial [Salmonella enterica] diamond 4950 84 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Salmonella Salmonella enterica
2690888 2690888 PRJEB82358_P_NODE_17723_length_246_cov_0.890173_g17712_i0 PRJEB82358 17723 246 0.890173 2.18982558 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 141 1.0199999999999998e-37   NR MFI5345532.1 2030800 g17712 i0 83.1 1.86585365853659 77 13 93.9 0 245 15 126 202 MFI5345532.1 porin [Elusimicrobiota bacterium] diamond 459 141 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
2690904 2690904 PRJEB82358_P_NODE_20423_length_230_cov_3.471338_g20412_i0 PRJEB82358 20423 230 3.471338 7.9840774 Pseudomonadati 3379134 Bacteria Bacteria 65.5 3.11e-12   NR MCP6231668.1 573 g20412 i0 100 1.13478260869565 29 0 37.8 0 3 89 25 53 MCP6231668.1 30S ribosomal protein S11 [Klebsiella pneumoniae] diamond 261 65.5 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella pneumoniae
3548014 3548014 PRJEB82358_P_NODE_18643_length_242_cov_0.911243_g18632_i0 PRJEB82358 18643 242 0.911243 2.20520806 Burkholderia 32008 Bacteria Bacteria 409 1.12e-109   NTclustered gi|2090904009|gb|CP082808.1| 488447 g18632 i0 100 49.2314049586777 221 0 91 0 22 242 331364 331144 Burkholderia contaminans strain SCAID TST1-2021 (11/270) chromosome 2, complete sequence blastn 11914 409 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia contaminans
3548023 3548023 PRJEB82358_P_NODE_22983_length_205_cov_8.227273_g22972_i0 PRJEB82358 22983 205 8.227273 16.86590965 Burkholderia 32008 Bacteria Bacteria 348 2.0400000000000002e-91   NTclustered gi|1712365328|gb|CP042164.1| 488447 g22972 i0 100 91.9268292682927 188 0 92 0 18 205 2682179 2682366 Burkholderia contaminans strain ZCC chromosome 1, complete sequence blastn 18845 348 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia contaminans
3967039 3967039 PRJEB82358_P_NODE_5344_length_407_cov_6.511976_g5333_i0 PRJEB82358 5344 407 6.511976 26.50374232 Azospirillum argentinense 2970906 Bacteria Bacteria 320 9.7e-83   NTclustered gi|646258717|gb|CP007794.1| 2970906 g5333 i0 81.378 97.031941031941 392 73 96 0 5 396 411250 410859 Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence blastn 39492 320 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodospirillales Azospirillaceae Azospirillum Azospirillum argentinense
5243370 5243370 PRJEB82358_P_NODE_13845_length_272_cov_2.984925_g13834_i0 PRJEB82358 13845 272 2.984925 8.118996 Rheinheimera sp. MM224 3019969 Bacteria Bacteria 374 4.6899999999999985e-99   NTclustered gi|2321869226|emb|OX352320.1| 3019969 g13834 i0 92.969 1.88602941176471 256 18 94 0 17 272 3612341 3612596 Rheinheimera sp. isolate Rheinheimera MM224 assembly genome assembly, chromosome: MM224 blastn 513 374 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera sp. MM224
5243401 5243401 PRJEB82358_P_NODE_17945_length_245_cov_1.465116_g17934_i0 PRJEB82358 17945 245 1.465116 3.5895342 Rheinheimera sp. MM224 3019969 Bacteria Bacteria 313 9.19e-81   NTclustered gi|2321869226|emb|OX352320.1| 3019969 g17934 i0 93.023 0.877551020408163 215 14 87 1 1 214 3606466 3606680 Rheinheimera sp. isolate Rheinheimera MM224 assembly genome assembly, chromosome: MM224 blastn 215 313 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera sp. MM224
5243410 5243410 PRJEB82358_P_NODE_19245_length_238_cov_2.600000_g19234_i0 PRJEB82358 19245 238 2.6 6.188 Pseudomonadati 3379134 Bacteria Bacteria 88.2 2.12e-18   NR MEE8238369.1 1913989 g19234 i0 76.9 3.49159663865546 52 12 65.5 0 83 238 320 371 MEE8238369.1 IS3 family transposase [Gammaproteobacteria bacterium] diamond 831 88.2 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria       Gammaproteobacteria bacterium
5243411 5243411 PRJEB82358_P_NODE_19265_length_238_cov_2.048485_g19254_i0 PRJEB82358 19265 238 2.048485 4.8753943 Salmonella enterica 28901 Bacteria Bacteria 95.5 1.22e-22   NR WP_187069234.1 28901 g19254 i0 78.6 2.10504201680672 56 12 70.6 0 228 61 112 167 WP_187069234.1 reverse transcriptase family protein, partial [Salmonella enterica] diamond 501 95.5 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Salmonella Salmonella enterica
6518972 6518972 PRJEB82358_P_NODE_13086_length_279_cov_1.407767_g13075_i0 PRJEB82358 13086 279 1.407767 3.92766993 Acinetobacter sp. TAC-1 3027470 Bacteria Bacteria 481 2.77e-131   NTclustered gi|2452124891|gb|CP118892.1| 3027470 g13075 i0 99.62 17.820788530466 263 1 94 0 17 279 4611757 4612019 Acinetobacter sp. TAC-1 chromosome, complete genome blastn 4972 481 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales Moraxellaceae Acinetobacter Acinetobacter sp. TAC-1
6518983 6518983 PRJEB82358_P_NODE_13866_length_272_cov_1.914573_g13855_i0 PRJEB82358 13866 272 1.914573 5.20763856 Burkholderia contaminans 488447 Bacteria Bacteria 494 3.45e-135   NTclustered gi|1240699256|dbj|AP018360.1| 488447 g13855 i0 100 50.1654411764706 267 0 98 0 1 267 102305 102571 Burkholderia contaminans CH-1 plasmid pBC453 DNA, scaffold: pBC453 blastn 13645 494 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia contaminans
6519004 6519004 PRJEB82358_P_NODE_15566_length_259_cov_1.413978_g15555_i0 PRJEB82358 15566 259 1.413978 3.66220302 Stenotrophomonas maltophilia 40324 Bacteria Bacteria 462 9.2e-126   NTclustered gi|1702229802|gb|CP037858.1| 40324 g15555 i0 98.842 99.6718146718147 259 3 100 0 1 259 1629226 1629484 Stenotrophomonas maltophilia strain X28 chromosome, complete genome blastn 25815 462 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Stenotrophomonas Stenotrophomonas maltophilia
7374951 7374951 PRJEB82358_P_NODE_14886_length_264_cov_1.240838_g14875_i0 PRJEB82358 14886 264 1.240838 3.27581232 Pseudobdellovibrio sp. HCB154 3386277 Bacteria Bacteria 72.8 6.15e-13   NR WP_409479080.1 3386277 g14875 i0 87.1 0.352272727272727 31 4 35.2 0 21 113 259 289 WP_409479080.1 M15 family metallopeptidase [Pseudobdellovibrio sp. HCB154] diamond 93 72.8 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Pseudobdellovibrio Pseudobdellovibrio sp. HCB154
7793069 7793069 PRJEB82358_P_NODE_14747_length_265_cov_1.880208_g14736_i0 PRJEB82358 14747 265 1.880208 4.9825512 Brevundimonas subvibrioides 74313 Bacteria Bacteria 56.5 0.002   NTclustered gi|2417057360|gb|CP114542.1| 74313 g14736 i0 100 0.113207547169811 30 0 11 0 108 137 462367 462338 Brevundimonas subvibrioides strain Br6 chromosome, complete genome blastn 30 56.5 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Brevundimonas Brevundimonas subvibrioides
7793085 7793085 PRJEB82358_P_NODE_17107_length_249_cov_0.875000_g17096_i0 PRJEB82358 17107 249 0.875 2.17875 Bradyrhizobium sp. Ash2021 2954771 Bacteria Bacteria 204 5.879999999999999e-48   NTclustered gi|2574021572|gb|CP100604.1| 2954771 g17096 i0 89.441 8.79919678714859 161 17 65 0 38 198 324658 324498 Bradyrhizobium sp. Ash2021 chromosome, complete genome blastn 2191 204 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. Ash2021
7793087 7793087 PRJEB82358_P_NODE_17987_length_245_cov_0.895349_g17976_i0 PRJEB82358 17987 245 0.895349 2.19360505 Bradyrhizobium guangzhouense 1325095 Bacteria Bacteria 75 4.72e-9   NTclustered gi|1562497345|gb|CP030053.1| 1325095 g17976 i0 87.5 1.18775510204082 64 8 26 0 166 229 311676 311739 Bradyrhizobium guangzhouense strain CCBAU 51670 chromosome, complete genome blastn 291 75 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium guangzhouense
7793091 7793091 PRJEB82358_P_NODE_18647_length_242_cov_0.911243_g18636_i0 PRJEB82358 18647 242 0.911243 2.20520806 Bradyrhizobium sp. CIAT3101 439387 Bacteria Bacteria 335 1.9299999999999993e-87   NTclustered gi|2484545193|gb|CP121634.1| 439387 g18636 i0 92.672 9.30578512396694 232 17 96 0 11 242 2776243 2776474 Bradyrhizobium sp. CIAT3101 chromosome, complete genome blastn 2252 335 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. CIAT3101
7793121 7793121 PRJEB82358_P_NODE_22767_length_208_cov_4.237037_g22756_i0 PRJEB82358 22767 208 4.237037 8.81303696 Comamonas terrigena 32013 Bacteria Bacteria 385 1.58e-102   NTclustered gi|1683391494|dbj|AP019749.1| 1219032 g22756 i0 100 96.7355769230769 208 0 100 0 1 208 812014 812221 Comamonas terrigena NBRC 13299 DNA, complete genome blastn 20121 385 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Comamonas Comamonas terrigena
9068078 9068078 PRJEB82358_P_NODE_12008_length_289_cov_1.592593_g11997_i0 PRJEB82358 12008 289 1.592593 4.60259377 Pedobacter sp. UC225_65 3350173 Bacteria Bacteria 420 6.359999999999998e-113   NTclustered gi|2814008831|gb|CP170550.1| 3350173 g11997 i0 93.031 22.083044982699 287 20 99 0 3 289 1268481 1268767 Pedobacter sp. UC225_65 chromosome, complete genome blastn 6382 420 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter sp. UC225_65
9068082 9068082 PRJEB82358_P_NODE_12628_length_283_cov_3.447619_g12617_i0 PRJEB82358 12628 283 3.447619 9.75676177 Ralstonia solanacearum 305 Bacteria Bacteria 63.9 1.21e-5   NTclustered gi|959220006|emb|LN899824.1| 305 g12617 i0 100 33.0742049469965 34 0 12 0 5 38 5473028 5472995 Ralstonia solanacearum genome assembly 9 genomes, chromosome : VI blastn 9360 63.9 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia Ralstonia solanacearum
9068117 9068117 PRJEB82358_P_NODE_16588_length_251_cov_4.488764_g16577_i0 PRJEB82358 16588 251 4.488764 11.26679764 Pseudomonas aeruginosa 287 Bacteria Bacteria 115 4.66e-30   NR WP_308699935.1 287 g16577 i0 66.2 0.920318725099602 77 26 92 0 232 2 68 144 WP_308699935.1 hypothetical protein, partial [Pseudomonas aeruginosa] diamond 231 115 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa
9068118 9068118 PRJEB82358_P_NODE_16708_length_251_cov_0.865169_g16697_i0 PRJEB82358 16708 251 0.865169 2.17157419 Rheinheimera sp. MM224 3019969 Bacteria Bacteria 292 1.2299999999999999e-74   NTclustered gi|2321869226|emb|OX352320.1| 3019969 g16697 i0 89.565 0.916334661354582 230 24 92 0 1 230 114179 114408 Rheinheimera sp. isolate Rheinheimera MM224 assembly genome assembly, chromosome: MM224 blastn 230 292 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera sp. MM224
9068128 9068128 PRJEB82358_P_NODE_17748_length_246_cov_0.890173_g17737_i0 PRJEB82358 17748 246 0.890173 2.18982558 Rheinheimera sp. MM224 3019969 Bacteria Bacteria 294 3.34e-75   NTclustered gi|2321869226|emb|OX352320.1| 3019969 g17737 i0 88.259 2.09349593495935 247 28 100 1 1 246 1137710 1137956 Rheinheimera sp. isolate Rheinheimera MM224 assembly genome assembly, chromosome: MM224 blastn 515 294 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera sp. MM224
9068150 9068150 PRJEB82358_P_NODE_20728_length_228_cov_3.335484_g20717_i0 PRJEB82358 20728 228 3.335484 7.60490352 Rheinheimera sp. MM224 3019969 Bacteria Bacteria 108 4.28e-19   NTclustered gi|2321869226|emb|OX352320.1| 3019969 g20717 i0 87.629 0.425438596491228 97 7 40 5 9 100 3373986 3374082 Rheinheimera sp. isolate Rheinheimera MM224 assembly genome assembly, chromosome: MM224 blastn 97 108 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera sp. MM224
9068165 9068165 PRJEB82358_P_NODE_23928_length_197_cov_4.241935_g23917_i0 PRJEB82358 23928 197 4.241935 8.35661195 Rheinheimera mangrovi 2498451 Bacteria Bacteria 305 1.19e-78   NTclustered gi|1546439273|gb|CP034683.1| 2498451 g23917 i0 95.767 1.91878172588832 189 8 96 0 1 189 4015085 4015273 Rheinheimera mangrovi strain LHK132 chromosome, complete genome blastn 378 305 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera mangrovi
9068208 9068208 PRJEB82358_P_NODE_5368_length_407_cov_2.871257_g5357_i0 PRJEB82358 5368 407 2.871257 11.68601599 Rheinheimera sp. MM224 3019969 Bacteria Bacteria 730 0   NTclustered gi|2321869226|emb|OX352320.1| 3019969 g5357 i0 99.017 4.75675675675676 407 4 100 0 1 407 935776 936182 Rheinheimera sp. isolate Rheinheimera MM224 assembly genome assembly, chromosome: MM224 blastn 1936 730 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera sp. MM224
9068211 9068211 PRJEB82358_P_NODE_5608_length_399_cov_7.481595_g5597_i0 PRJEB82358 5608 399 7.481595 29.85156405 Bathymodiolus thermophilus thioautotrophic gill symbiont 2360 Bacteria Bacteria 52.8 0.038   NTclustered gi|1509233682|gb|CP024634.1| 2360 g5597 i0 100 0.0701754385964912 28 0 7 0 26 53 1316194 1316167 Bathymodiolus thermophilus thioautotrophic gill symbiont strain EPR9N chromosome, complete genome blastn 28 52.8 1 Bacteria sulfur-oxidizing symbionts Pseudomonadati Pseudomonadota Gammaproteobacteria       Bathymodiolus thermophilus thioautotrophic gill symbiont
9068229 9068229 PRJEB82358_P_NODE_6808_length_370_cov_2.639731_g6797_i0 PRJEB82358 6808 370 2.639731 9.7670047 Erythrobacter sp. HL-111 1798193 Bacteria Bacteria 56.5 0.003   NTclustered gi|1085796223|emb|LT629743.1| 1798193 g6797 i0 96.97 0.0891891891891892 33 1 9 0 336 368 663750 663718 Erythrobacter sp. HL-111 genome assembly, chromosome: I blastn 33 56.5 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Erythrobacteraceae Erythrobacter Erythrobacter sp. HL-111
9925457 9925457 PRJEB82358_P_NODE_12868_length_281_cov_1.875000_g12857_i0 PRJEB82358 12868 281 1.875 5.26875 root 1 Root_unresolved Root_unresolved 67.6 9.25e-7   NTclustered gi|559131676|tpe|HG788570.1| 1408204 g12857 i0 100 12.4199288256228 36 0 13 0 23 58 424 389 TPA: Uncultured Termite group 1 bacterium phylotype Rs-D17 transfer-messenger mRNA uncul_Termi_RsD17, single chain mature transcript blastn 3490 67.6 1 Bacteria   Pseudomonadati Elusimicrobiota Endomicrobiia Endomicrobiales Endomicrobiaceae Candidatus Endomicrobiellum Candidatus Endomicrobiellum trichonymphae
9925479 9925479 PRJEB82358_P_NODE_23368_length_201_cov_12.562500_g23357_i0 PRJEB82358 23368 201 12.5625 25.250625 Rhizobium 379 Bacteria Bacteria 178 2.76e-40   NTclustered gi|2744297223|gb|CP157968.1| 3158966 g23357 i0 93.333 16.3034825870647 120 8 60 0 11 130 1574507 1574626 Rhizobium sp. ZPR4 chromosome 2, complete sequence blastn 3277 178 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Rhizobiaceae Rhizobium Rhizobium sp. ZPR4
10343765 10343765 PRJEB82358_P_NODE_14709_length_265_cov_3.015625_g14698_i0 PRJEB82358 14709 265 3.015625 7.99140625 Bacteria 2 Bacteria Bacteria 155 8.56e-42   NR OFZ30102.1 1797389 g14698 i0 86.2 2.95471698113208 87 12 98.5 0 263 3 454 540 OFZ30102.1 MAG: cation transporter [Bdellovibrionales bacterium RIFCSPHIGHO2_01_FULL_40_29] diamond 783 156 0.993589743589744 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium RIFCSPHIGHO2_01_FULL_40_29
10343803 10343803 PRJEB82358_P_NODE_19389_length_237_cov_2.524390_g19378_i0 PRJEB82358 19389 237 2.52439 5.9828043 Rheinheimera sp. MM224 3019969 Bacteria Bacteria 228 3.2899999999999986e-55   NTclustered gi|2321869226|emb|OX352320.1| 3019969 g19378 i0 85.714 1.85654008438819 217 30 91 1 1 216 1907335 1907119 Rheinheimera sp. isolate Rheinheimera MM224 assembly genome assembly, chromosome: MM224 blastn 440 228 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera sp. MM224
10343820 10343820 PRJEB82358_P_NODE_21929_length_216_cov_9.433566_g21918_i0 PRJEB82358 21929 216 9.433566 20.37650256 uncultured Pseudomonadota bacterium 153809 Bacteria Bacteria 272 1.34e-68   NTclustered gi|2874253794|emb|OY969778.1| 153809 g21918 i0 90.385 2.43055555555556 208 19 96 1 10 216 1752654 1752447 MAG: uncultured proteobacterium isolate MFD09671.bin.2.31 genome assembly, chromosome: 1 blastn 525 272 1 Bacteria   Pseudomonadati Pseudomonadota         uncultured Pseudomonadota bacterium
11619255 11619255 PRJEB82358_P_NODE_11910_length_290_cov_1.622120_g11899_i0 PRJEB82358 11910 290 1.62212 4.704148 Pseudomonas aeruginosa 287 Bacteria Bacteria 137 3.4599999999999993e-40   NR WP_308700017.1 287 g11899 i0 85.9 0.73448275862069 71 10 73.4 0 290 78 14 84 WP_308700017.1 hypothetical protein, partial [Pseudomonas aeruginosa] diamond 213 137 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa
11619290 11619290 PRJEB82358_P_NODE_16230_length_254_cov_1.591160_g16219_i0 PRJEB82358 16230 254 1.59116 4.0415464 Rheinheimera mangrovi 2498451 Bacteria Bacteria 353 5.65e-93   NTclustered gi|1546439273|gb|CP034683.1| 2498451 g16219 i0 95.475 4.27165354330709 221 10 87 0 33 253 864833 864613 Rheinheimera mangrovi strain LHK132 chromosome, complete genome blastn 1085 353 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera mangrovi
11619307 11619307 PRJEB82358_P_NODE_17810_length_245_cov_5.284884_g17799_i0 PRJEB82358 17810 245 5.284884 12.9479658 Pedobacter sp. ASV12 2795120 Bacteria Bacteria 149 1.21e-41   NR WP_233165755.1 2795120 g17799 i0 96.3 0.979591836734694 80 3 98 0 6 245 226 305 WP_233165755.1 endonuclease/exonuclease/phosphatase family protein [Pedobacter sp. ASV12] diamond 240 149 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter sp. ASV12
11619341 11619341 PRJEB82358_P_NODE_23450_length_201_cov_4.507812_g23439_i0 PRJEB82358 23450 201 4.507812 9.06070212 Rheinheimera mangrovi 2498451 Bacteria Bacteria 237 4.4999999999999996e-58   NTclustered gi|1546439273|gb|CP034683.1| 2498451 g23439 i0 89.362 0.935323383084577 188 20 94 0 12 199 2264313 2264126 Rheinheimera mangrovi strain LHK132 chromosome, complete genome blastn 188 237 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera mangrovi
11619345 11619345 PRJEB82358_P_NODE_23930_length_197_cov_4.201613_g23919_i0 PRJEB82358 23930 197 4.201613 8.27717761 Pseudomonas aeruginosa 287 Bacteria Bacteria 91.3 1.51e-21   NR WP_308700029.1 287 g23919 i0 67.7 3.77664974619289 62 18 91.4 1 181 2 44 105 WP_308700029.1 hypothetical protein, partial [Pseudomonas aeruginosa] diamond 744 91.3 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa
12476352 12476352 PRJEB82358_P_NODE_12870_length_281_cov_1.774038_g12859_i0 PRJEB82358 12870 281 1.774038 4.98504678 Frigoriglobus 2774146 Bacteria Bacteria 268 2.3599999999999997e-67   NTclustered gi|2874253853|emb|OY969909.1| 1914239 g12859 i0 92.513 5.83985765124555 187 14 67 0 95 281 7910603 7910789 MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 blastn 1641 268 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   uncultured Gemmataceae bacterium
12476368 12476368 PRJEB82358_P_NODE_17110_length_249_cov_0.875000_g17099_i0 PRJEB82358 17110 249 0.875 2.17875 Enterobacteriaceae 543 Bacteria Bacteria 460 3.16e-125   NTclustered gi|2653344983|gb|CP142438.1| 562 g17099 i0 100 165.855421686747 249 0 100 0 1 249 226281 226529 Escherichia coli strain Case 2 chromosome, complete genome blastn 41298 460 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
12476370 12476370 PRJEB82358_P_NODE_17510_length_247_cov_0.885057_g17499_i0 PRJEB82358 17510 247 0.885057 2.18609079 Delftia 80865 Bacteria Bacteria 446 8.759999999999998e-121   NTclustered gi|1134452940|gb|CP019171.1| 80866 g17499 i0 99.19 88.6113360323887 247 2 100 0 1 247 791850 791604 Delftia acidovorans isolate ANG1, complete genome blastn 21887 446 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Delftia Delftia acidovorans
12894307 12894307 PRJEB82358_P_NODE_13911_length_271_cov_5.207071_g13900_i0 PRJEB82358 13911 271 5.207071 14.11116241 Rheinheimera mangrovi 2498451 Bacteria Bacteria 259 1.36e-64   NTclustered gi|1546439273|gb|CP034683.1| 2498451 g13900 i0 84.674 0.96309963099631 261 38 96 2 10 269 977210 977469 Rheinheimera mangrovi strain LHK132 chromosome, complete genome blastn 261 259 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera mangrovi
12894329 12894329 PRJEB82358_P_NODE_16211_length_254_cov_2.138122_g16200_i0 PRJEB82358 16211 254 2.138122 5.43082988 Pseudomonas aeruginosa 287 Bacteria Bacteria 128 1.86e-36   NR WP_308699888.1 287 g16200 i0 71.4 0.992125984251969 84 24 99.2 0 1 252 21 104 WP_308699888.1 reverse transcriptase family protein, partial [Pseudomonas aeruginosa] diamond 252 128 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa
12894335 12894335 PRJEB82358_P_NODE_17011_length_249_cov_2.755682_g17000_i0 PRJEB82358 17011 249 2.755682 6.86164818 Rheinheimera sp. MM224 3019969 Bacteria Bacteria 427 3.2e-115   NTclustered gi|2321869226|emb|OX352320.1| 3019969 g17000 i0 97.59 19.8915662650602 249 6 100 0 1 249 834923 835171 Rheinheimera sp. isolate Rheinheimera MM224 assembly genome assembly, chromosome: MM224 blastn 4953 427 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera sp. MM224
12894339 12894339 PRJEB82358_P_NODE_17691_length_246_cov_1.745665_g17680_i0 PRJEB82358 17691 246 1.745665 4.2943359 Rhizobium sp. 11515TR 2028343 Bacteria Bacteria 333 7.089999999999999e-87   NTclustered gi|1238365084|gb|CP022998.1| 2028343 g17680 i0 91.057 97.6138211382114 246 22 100 0 1 246 818492 818247 Rhizobium sp. 11515TR chromosome, complete genome blastn 24013 333 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Rhizobiaceae Rhizobium Rhizobium sp. 11515TR
12894347 12894347 PRJEB82358_P_NODE_18531_length_242_cov_2.840237_g18520_i0 PRJEB82358 18531 242 2.840237 6.87337354 Rheinheimera mangrovi 2498451 Bacteria Bacteria 235 2.02e-57   NTclustered gi|1546439273|gb|CP034683.1| 2498451 g18520 i0 85.232 1.91322314049587 237 26 98 6 4 240 4383375 4383148 Rheinheimera mangrovi strain LHK132 chromosome, complete genome blastn 463 235 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera mangrovi
12894352 12894352 PRJEB82358_P_NODE_18831_length_241_cov_0.916667_g18820_i0 PRJEB82358 18831 241 0.916667 2.20916747 Bradyrhizobium cosmicum 1404864 Bacteria Bacteria 279 9.14e-71   NTclustered gi|381356398|dbj|AP012279.1| 1404864 g18820 i0 88.646 14 229 26 95 0 1 229 5140789 5141017 Bradyrhizobium cosmicum S23321 DNA, complete genome blastn 3374 279 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium cosmicum
12894365 12894365 PRJEB82358_P_NODE_20851_length_227_cov_4.467532_g20840_i0 PRJEB82358 20851 227 4.467532 10.14129764 Flavihumibacter rivuli 2838156 Bacteria Bacteria 154 5.39e-33   NTclustered gi|2198890466|gb|CP092334.1| 2838156 g20840 i0 83.333 6.18061674008811 168 26 74 2 59 225 4222954 4222788 Flavihumibacter rivuli strain IMCC34838 chromosome, complete genome blastn 1403 154 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Flavihumibacter Flavihumibacter rivuli
12894380 12894380 PRJEB82358_P_NODE_23431_length_201_cov_5.125000_g23420_i0 PRJEB82358 23431 201 5.125 10.30125 Mucilaginibacter sp. Mucisp86 3243060 Bacteria Bacteria 171 4.6299999999999996e-38   NTclustered gi|2897220482|gb|CP168503.1| 3243060 g23420 i0 82.564 0.970149253731343 195 33 97 1 4 198 3651064 3650871 Mucilaginibacter sp. Mucisp86 strain CT11-86 chromosome, complete genome blastn 195 171 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Mucilaginibacter Mucilaginibacter sp. Mucisp86
13750838 13750838 PRJEB82358_P_NODE_12731_length_282_cov_3.669856_g12720_i0 PRJEB82358 12731 282 3.669856 10.34899392 Stenotrophomonas 40323 Bacteria Bacteria 52.8 0.026   NTclustered gi|922679809|gb|CP011010.1| 40324 g12720 i0 94.286 0.24822695035461 35 1 12 1 198 231 327778 327744 Stenotrophomonas maltophilia strain ISMMS3, complete genome blastn 70 52.8 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Stenotrophomonas Stenotrophomonas maltophilia
13750839 13750839 PRJEB82358_P_NODE_13611_length_274_cov_2.706468_g13600_i0 PRJEB82358 13611 274 2.706468 7.41572232 Rheinheimera 67575 Bacteria Bacteria 377 3.66e-100   NTclustered gi|1546439273|gb|CP034683.1| 2498451 g13600 i0 95 2.77007299270073 240 12 88 0 1 240 3351196 3350957 Rheinheimera mangrovi strain LHK132 chromosome, complete genome blastn 759 377 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera mangrovi
13750851 13750851 PRJEB82358_P_NODE_17751_length_246_cov_0.890173_g17740_i0 PRJEB82358 17751 246 0.890173 2.18982558 Acinetobacter 469 Bacteria Bacteria 422 1.47e-113   NTclustered gi|2021489239|gb|CP072307.1| 470 g17740 i0 100 7.0650406504065 228 0 93 0 1 228 4335 4562 Acinetobacter baumannii strain KSK Sensitive plasmid p2KSKSensitive, complete sequence blastn 1738 422 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales Moraxellaceae Acinetobacter Acinetobacter baumannii
14169161 14169161 PRJEB82358_P_NODE_12532_length_284_cov_2.142180_g12521_i0 PRJEB82358 12532 284 2.14218 6.0837912 Nevskia sp. 1929292 Bacteria Bacteria 174 1.7299999999999994e-48   NR MDE0852846.1 1929292 g12521 i0 100 0.961267605633803 91 0 96.1 0 2 274 162 252 MDE0852846.1 GNAT family N-acetyltransferase [Nevskia sp.] diamond 273 174 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Nevskiales Nevskiaceae Nevskia Nevskia sp.
14169218 14169218 PRJEB82358_P_NODE_18952_length_240_cov_3.239521_g18941_i0 PRJEB82358 18952 240 3.239521 7.7748504 Rheinheimera mangrovi 2498451 Bacteria Bacteria 355 1.47e-93   NTclustered gi|1546439273|gb|CP034683.1| 2498451 g18941 i0 94.737 1.9 228 12 95 0 3 230 1093422 1093649 Rheinheimera mangrovi strain LHK132 chromosome, complete genome blastn 456 355 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera mangrovi
14169221 14169221 PRJEB82358_P_NODE_19132_length_239_cov_2.367470_g19121_i0 PRJEB82358 19132 239 2.36747 5.6582533 Geopseudomonas guangdongensis 1245526 Bacteria Bacteria 80.5 9.85e-11   NTclustered gi|1085971387|emb|LT629780.1| 1245526 g19121 i0 92.727 4.82426778242678 55 4 23 0 183 237 2797420 2797366 Pseudomonas guangdongensis strain CCTCC 2012022 genome assembly, chromosome: I blastn 1153 80.5 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Geopseudomonas Geopseudomonas guangdongensis
15025316 15025316 PRJEB82358_P_NODE_13632_length_274_cov_1.407960_g13621_i0 PRJEB82358 13632 274 1.40796 3.8578104 Pseudomonadota bacterium 1977087 Bacteria Bacteria 154 8.879999999999997e-42   NR RYZ99655.1 1977087 g13621 i0 87.1 0.930656934306569 85 11 93.1 0 3 257 437 521 RYZ99655.1 MAG: acyl-CoA dehydrogenase, partial [Pseudomonadota bacterium] diamond 255 154 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
15025322 15025322 PRJEB82358_P_NODE_14392_length_268_cov_1.241026_g14381_i0 PRJEB82358 14392 268 1.241026 3.32594968 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 135 1.08e-35   NR HEY8280201.1 3034175 g14381 i0 91.5 0.794776119402985 71 6 79.5 0 56 268 1 71 HEY8280201.1 NADH-quinone oxidoreductase subunit NuoF [Bdellovibrionota bacterium] diamond 213 135 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
15025328 15025328 PRJEB82358_P_NODE_15312_length_260_cov_7.245989_g15301_i0 PRJEB82358 15312 260 7.245989 18.8395714 Flavobacterium 237 Bacteria Bacteria 52.8 0.024   NTclustered gi|2447257787|gb|CP092822.1| 1454066 g15301 i0 100 0.215384615384615 28 0 11 0 200 227 1435096 1435069 Flavobacterium sp. WW92 chromosome, complete genome blastn 56 52.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. WW92
15025340 15025340 PRJEB82358_P_NODE_21092_length_226_cov_3.392157_g21081_i0 PRJEB82358 21092 226 3.392157 7.66627482 Rheinheimera sp. SA_1 1827365 Bacteria Bacteria 142 6.27e-39   NR WP_068062662.1 1827365 g21081 i0 98.7 0.995575221238938 75 1 99.6 0 1 225 50 124 WP_068062662.1 MFS transporter [Rheinheimera sp. SA_1] diamond 225 142 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera sp. SA_1
15443301 15443301 PRJEB82358_P_NODE_17113_length_249_cov_0.875000_g17102_i0 PRJEB82358 17113 249 0.875 2.17875 Aquisphaera giovannonii 406548 Bacteria Bacteria 246 9.629999999999999e-61   NTclustered gi|1730068067|gb|CP042997.1| 406548 g17102 i0 88.406 3.06827309236948 207 20 82 2 1 205 274530 274734 Aquisphaera giovannonii strain OJF2 chromosome, complete genome blastn 764 246 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae Aquisphaera Aquisphaera giovannonii
15443312 15443312 PRJEB82358_P_NODE_18213_length_244_cov_0.900585_g18202_i0 PRJEB82358 18213 244 0.900585 2.1974274 Pseudomonas fluorescens 294 Bacteria Bacteria 58.4 4.73e-4   NTclustered gi|2701809830|emb|OZ024668.1| 294 g18202 i0 94.595 0.266393442622951 37 2 15 0 1 37 5603470 5603506 Pseudomonas fluorescens isolate PS652 genome assembly, chromosome: 1 blastn 65 58.4 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas fluorescens
15443359 15443359 PRJEB82358_P_NODE_3113_length_501_cov_2.586449_g3102_i0 PRJEB82358 3113 501 2.586449 12.95810949 Caulobacteraceae bacterium 1978230 Bacteria Bacteria 119 1.38e-28   NR MEI9964495.1 1978230 g3102 i0 56.5 1.70658682634731 108 46 64.1 1 337 17 9 116 MEI9964495.1 carboxylesterase family protein [Caulobacteraceae bacterium] diamond 855 119 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae   Caulobacteraceae bacterium
16300135 16300135 PRJEB82358_P_NODE_19253_length_238_cov_2.339394_g19242_i0 PRJEB82358 19253 238 2.339394 5.56775772 Pseudomonadota bacterium 1977087 Bacteria Bacteria 154 1.8e-41   NR MEW6596197.1 1977087 g19242 i0 97.3 0.932773109243697 74 2 93.3 0 16 237 94 167 MEW6596197.1 exo-alpha-sialidase [Pseudomonadota bacterium] diamond 222 154 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
16300139 16300139 PRJEB82358_P_NODE_21233_length_225_cov_4.309211_g21222_i0 PRJEB82358 21233 225 4.309211 9.69572475 Vibrio 662 Bacteria Bacteria 289 1.3999999999999997e-73   NTclustered gi|2893218517|gb|CP112883.1| 2989733 g21222 i0 90.135 1.98222222222222 223 21 99 1 1 222 1364548 1364770 Vibrio sp. TBRI6 chromosome 2 blastn 446 289 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales Vibrionaceae Vibrio Vibrio sp. TBRI6
16717473 16717473 PRJEB82358_P_NODE_10874_length_302_cov_2.598253_g10863_i0 PRJEB82358 10874 302 2.598253 7.84672406 Burkholderia sp. PAMC 28687 1795874 Bacteria Bacteria 52.8 0.028   NTclustered gi|1001851200|gb|CP014508.1| 1795874 g10863 i0 96.774 0.102649006622517 31 1 10 0 74 104 149605 149575 Burkholderia sp. PAMC 28687 plasmid 1, complete sequence blastn 31 52.8 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia sp. PAMC 28687
16717509 16717509 PRJEB82358_P_NODE_14374_length_268_cov_1.897436_g14363_i0 PRJEB82358 14374 268 1.897436 5.08512848 Bdellovibrionota 3018035 Bacteria Bacteria 154 1.1099999999999998e-41   NR NUM89553.1 2053517 g14363 i0 85.4 2.98880597014925 89 13 99.6 0 1 267 98 186 NUM89553.1 DNA-directed RNA polymerase subunit beta' [Bdellovibrionales bacterium] diamond 801 154 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
16717513 16717513 PRJEB82358_P_NODE_14754_length_265_cov_1.604167_g14743_i0 PRJEB82358 14754 265 1.604167 4.25104255 Pedobacter sp. ASV12 2795120 Bacteria Bacteria 122 2.5699999999999997e-30   NR WP_199137449.1 2795120 g14743 i0 100 0.679245283018868 60 0 67.9 0 264 85 441 500 WP_199137449.1 GH3 auxin-responsive promoter family protein [Pedobacter sp. ASV12] diamond 180 122 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter sp. ASV12
16717541 16717541 PRJEB82358_P_NODE_18114_length_244_cov_2.438596_g18103_i0 PRJEB82358 18114 244 2.438596 5.95017424 Thalassotalea sp. PS06 2594005 Bacteria Bacteria 117 7.6900000000000005e-22   NTclustered gi|1707191241|gb|CP041638.1| 2594005 g18103 i0 83.465 0.520491803278688 127 19 52 2 1 126 1157214 1157339 Thalassotalea sp. PS06 chromosome, complete genome blastn 127 117 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Alteromonadales Colwelliaceae Thalassotalea Thalassotalea sp. PS06
16717554 16717554 PRJEB82358_P_NODE_19634_length_235_cov_3.802469_g19623_i0 PRJEB82358 19634 235 3.802469 8.93580215 Shewanella decolorationis 256839 Bacteria Bacteria 283 6.859999999999999e-72   NTclustered gi|2024816785|gb|CP031775.3| 256839 g19623 i0 89.954 4.25531914893617 219 22 93 0 17 235 3398357 3398139 Shewanella decolorationis strain Ni1-3 chromosome, complete genome blastn 1000 283 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Alteromonadales Shewanellaceae Shewanella Shewanella decolorationis
16717560 16717560 PRJEB82358_P_NODE_20574_length_229_cov_3.769231_g20563_i0 PRJEB82358 20574 229 3.769231 8.63153899 Pseudodesulfovibrio tunisiensis 463192 Bacteria Bacteria 65.8 2.62e-6   NTclustered gi|2215688239|gb|CP094380.1| 463192 g20563 i0 91.667 0.209606986899563 48 2 21 2 7 53 2566645 2566599 Pseudodesulfovibrio tunisiensis strain RB22 chromosome, complete genome blastn 48 65.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Pseudodesulfovibrio Pseudodesulfovibrio tunisiensis
16717570 16717570 PRJEB82358_P_NODE_22454_length_211_cov_4.217391_g22443_i0 PRJEB82358 22454 211 4.217391 8.89869501 Rheinheimera sp. MM224 3019969 Bacteria Bacteria 226 1.0299999999999999e-54   NTclustered gi|2321869226|emb|OX352320.1| 3019969 g22443 i0 91.018 0.791469194312796 167 15 79 0 1 167 2756002 2755836 Rheinheimera sp. isolate Rheinheimera MM224 assembly genome assembly, chromosome: MM224 blastn 167 226 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera sp. MM224
17575336 17575336 PRJEB82358_P_NODE_11974_length_289_cov_3.500000_g11963_i0 PRJEB82358 11974 289 3.5 10.115 root 1 Root_unresolved Root_unresolved 110 1.56e-19   NTclustered gi|1001624410|dbj|LC056241.1| 562 g11963 i0 92.405 96.2698961937716 79 3 27 2 164 241 10 86 Escherichia coli plasmid pV085-a DNA, contig: V085-a_scaffold_18, strain: V085 blastn 27822 111 0.990990990990991 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
17575340 17575340 PRJEB82358_P_NODE_12934_length_280_cov_3.101449_g12923_i0 PRJEB82358 12934 280 3.101449 8.6840572 Pedobacter 84567 Bacteria Bacteria 294 3.88e-75   NTclustered gi|2844688158|gb|CP162529.1| 2739058 g12923 i0 88.259 15.9035714285714 247 27 88 2 34 280 3258921 3259165 Pedobacter foliorum strain LMG 31463 chromosome, complete genome blastn 4453 294 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter foliorum
17575364 17575364 PRJEB82358_P_NODE_23314_length_202_cov_5.759690_g23303_i0 PRJEB82358 23314 202 5.75969 11.6345738 Rheinheimera 67575 Bacteria Bacteria 283 5.729999999999999e-72   NTclustered gi|1546439273|gb|CP034683.1| 2498451 g23303 i0 94.595 1.82673267326733 185 7 91 3 1 184 3913771 3913589 Rheinheimera mangrovi strain LHK132 chromosome, complete genome blastn 369 283 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera mangrovi
17992332 17992332 PRJEB82358_P_NODE_17495_length_247_cov_1.379310_g17484_i0 PRJEB82358 17495 247 1.37931 3.4068957 uncultured Thermoanaerobaculia bacterium 3036248 Bacteria Bacteria 174 4.57e-39   NTclustered gi|2518540615|emb|OX638294.1| 3036248 g17484 i0 86.25 40.7692307692308 160 22 65 0 87 246 667249 667408 MAG: uncultured Thermoanaerobaculia bacterium isolate 42478a12-5572-4d71-959b-92ffd854a98d genome assembly, chromosome: 1 blastn 10070 174 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       uncultured Thermoanaerobaculia bacterium
17992342 17992342 PRJEB82358_P_NODE_18215_length_244_cov_0.900585_g18204_i0 PRJEB82358 18215 244 0.900585 2.1974274 Bradyrhizobiaceae bacterium 2072420 Bacteria Bacteria 182 2.689999999999999e-41   NTclustered gi|2120184306|gb|CP078014.1| 2072420 g18204 i0 82.759 3.27868852459016 203 35 83 0 42 244 2656516 2656718 MAG: Bradyrhizobiaceae bacterium isolate AGun1 chromosome blastn 800 182 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae   Bradyrhizobiaceae bacterium
17992350 17992350 PRJEB82358_P_NODE_20115_length_232_cov_3.389937_g20104_i0 PRJEB82358 20115 232 3.389937 7.86465384 Alteromonas sp. MB-3u-76 2058133 Bacteria Bacteria 272 1.46e-68   NTclustered gi|1304127146|gb|CP025115.1| 2058133 g20104 i0 88.739 1.91379310344828 222 25 96 0 11 232 2229168 2229389 Alteromonas sp. MB-3u-76 chromosome, complete genome blastn 444 272 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Alteromonadales Alteromonadaceae Alteromonas Alteromonas sp. MB-3u-76
17992354 17992354 PRJEB82358_P_NODE_20415_length_230_cov_3.681529_g20404_i0 PRJEB82358 20415 230 3.681529 8.4675167 Rheinheimera sp. MM224 3019969 Bacteria Bacteria 206 1.49e-48   NTclustered gi|2321869226|emb|OX352320.1| 3019969 g20404 i0 94.697 1.63478260869565 132 7 80 0 87 218 3582554 3582423 Rheinheimera sp. isolate Rheinheimera MM224 assembly genome assembly, chromosome: MM224 blastn 376 206 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Rheinheimera Rheinheimera sp. MM224
17992369 17992369 PRJEB82358_P_NODE_22555_length_210_cov_4.313869_g22544_i0 PRJEB82358 22555 210 4.313869 9.0591249 Bradyrhizobium sp. CCBAU 51765 1325102 Bacteria Bacteria 296 7.71e-76   NTclustered gi|1929514866|gb|CP030038.1| 1325102 g22544 i0 94.301 91.7809523809524 193 11 92 0 1 193 3305087 3305279 Bradyrhizobium sp. CCBAU 51765 chromosome, complete genome blastn 19274 296 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. CCBAU 51765
17992373 17992373 PRJEB82358_P_NODE_22855_length_207_cov_4.455224_g22844_i0 PRJEB82358 22855 207 4.455224 9.22231368 Brevundimonas albigilva 1312364 Bacteria Bacteria 124 3.7799999999999996e-24   NTclustered gi|2240661818|gb|CP097298.1| 1312364 g22844 i0 83.824 1.31400966183575 136 16 64 4 20 152 2651714 2651846 Brevundimonas albigilva strain KEME 9005-016 chromosome blastn 272 124 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Brevundimonas Brevundimonas albigilva

Next page

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;