RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB82358", tax_kingdom = "Fungi" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB82358 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28164076 28164076 PRJEB82358_P_NODE_22765_length_208_cov_4.288889_g22754_i0 PRJEB82358 22765 208 4.288889 8.92088912 Trametes 5324 Fungi Fungi 45.8 0.00192   NR KAI8982906.1 571087 g22754 i0 71.4 0.9375 21 6 30.3 0 166 104 159 179 KAI8982906.1 hypothetical protein BD414DRAFT_523443 [Trametes punicea] diamond 195 46.2 0.991341991341991 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Trametes Trametes punicea
31512499 31512499 PRJEB82358_P_NODE_17076_length_249_cov_1.272727_g17065_i0 PRJEB82358 17076 249 1.272727 3.16909023 Mycena 41247 Fungi Fungi 130 1.99e-35   NR KAJ7926712.1 230808 g17065 i0 73.2 2.95180722891566 82 22 98.8 0 249 4 136 217 KAJ7926712.1 (S)-2-haloacid dehalogenase IVA [Mycena leptocephala] diamond 735 131 0.99236641221374 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Mycenaceae Mycena Mycena leptocephala

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;