RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB82358" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJEB82358 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6519017 6519017 PRJEB82358_P_NODE_17526_length_247_cov_0.885057_g17515_i0 PRJEB82358 17526 247 0.885057 2.18609079 Planktothricoides raciborskii 132608 Bacteria Bacteria 52.8 0.022   NTclustered gi|2754673971|gb|CP159837.1| 2792601 g17515 i0 100 0.340080971659919 28 0 11 0 191 218 4729328 4729355 Planktothricoides raciborskii GIHE-MW2 chromosome, complete genome blastn 84 52.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Oscillatoriales Oscillatoriaceae Planktothricoides Planktothricoides raciborskii
27950369 27950369 PRJEB82358_P_NODE_11865_length_290_cov_3.594470_g11854_i0 PRJEB82358 11865 290 3.59447 10.423963 Leptolyngbyaceae cyanobacterium RM2_2_4 2720439 Bacteria Bacteria 47 9.5e-4   NR NJO48267.1 2720439 g11854 i0 30.6 0.879310344827586 85 47 85.9 4 2 250 81 155 NJO48267.1 hypothetical protein [Leptolyngbyaceae cyanobacterium RM2_2_4] diamond 255 47 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Leptolyngbyales Leptolyngbyaceae   Leptolyngbyaceae cyanobacterium RM2_2_4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;