RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB81463" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB81463 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16717159 16717159 PRJEB81463_P_NODE_21354_length_251_cov_1.500000_g21082_i0 PRJEB81463 21354 251 1.5 3.765 Rhodocaloribacter litoris 2558931 Bacteria Bacteria 219 2.1199999999999998e-52   NTclustered gi|2076465437|gb|CP076718.1| 2558931 g21082 i0 83.402 73.8804780876494 241 34 95 6 5 242 2709196 2709433 Rhodocaloribacter litoris strain ISCAR-4553 chromosome blastn 18544 219 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae Rhodocaloribacter Rhodocaloribacter litoris
17992034 17992034 PRJEB81463_P_NODE_23795_length_248_cov_0.891429_g23523_i0 PRJEB81463 23795 248 0.891429 2.21074392 Salinibacter ruber 146919 Bacteria Bacteria 326 1.2e-84   NTclustered gi|1473073668|gb|CP030356.1| 146919 g23523 i0 90.323 93.6532258064516 248 24 100 0 1 248 1077635 1077388 Salinibacter ruber strain P18 chromosome, complete genome blastn 23226 326 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Salinibacteraceae Salinibacter Salinibacter ruber

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;