RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJEB81463" and tax_kingdom = "Thermoproteati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 7 ✖

bioproject 1

  • PRJEB81463 · 7 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21817170 21817170 PRJEB81463_P_NODE_18258_length_261_cov_1.659574_g17986_i0 PRJEB81463 18258 261 1.659574 4.33148814 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 172 2.6e-51   NR HEY6404693.1 2169593 g17986 i0 96.5 2.96551724137931 86 3 98.9 0 260 3 206 291 HEY6404693.1 mannosyl-3-phosphoglycerate synthase [Nitrososphaeraceae archaeon] diamond 774 172 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
27722398 27722398 PRJEB81463_P_NODE_20344_length_253_cov_0.866667_g20072_i0 PRJEB81463 20344 253 0.866667 2.19266751 root 1 Root_unresolved Root_unresolved 144 5.3e-42   NR TMI28487.1 2026714 g20072 i0 86.6 6.80632411067194 82 11 97.2 0 248 3 48 129 TMI28487.1 MAG: deaminase, partial [Candidatus Bathyarchaeota archaeon] diamond 1722 145 0.993103448275862 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
28739694 28739694 PRJEB81463_P_NODE_30567_length_207_cov_4.305970_g30295_i0 PRJEB81463 30567 207 4.30597 8.9133579 Nitrosopumilus sp. 2024843 Archaea Archaea 74.7 1.28e-13   NR MCA9828535.1 2024843 g30295 i0 49.4 3.60869565217391 83 28 100 1 207 1 255 337 MCA9828535.1 fibronectin type III domain-containing protein [Nitrosopumilus sp.] diamond 747 74.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
31266626 31266626 PRJEB81463_P_NODE_11695_length_297_cov_2.187500_g11423_i0 PRJEB81463 11695 297 2.1875 6.496875 Nitrososphaera viennensis 1034015 Archaea Archaea 43.9 0.0214   NR WP_144239661.1 1034015 g11423 i0 33.3 1.03030303030303 102 62 98 3 5 295 56 156 WP_144239661.1 hypothetical protein [Nitrososphaera viennensis] diamond 306 43.9 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera viennensis
31677672 31677672 PRJEB81463_P_NODE_20957_length_252_cov_0.871508_g20685_i0 PRJEB81463 20957 252 0.871508 2.19620016 Nitrososphaera sp. 1971748 Archaea Archaea 108 1.46e-27   NR MCY1156884.1 1971748 g20685 i0 100 1.28571428571429 54 0 64.3 0 89 250 1 54 MCY1156884.1 putative RNA-binding protein containing domain [Nitrososphaera sp.] diamond 324 108 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
32461515 32461515 PRJEB81463_P_NODE_25819_length_245_cov_0.906977_g25547_i0 PRJEB81463 25819 245 0.906977 2.22209365 Archaea 2157 Archaea Archaea 53.5 4.54e-6   NR MCX8150526.1 2026714 g25547 i0 32.9 2.66938775510204 79 53 96.7 0 7 243 144 222 MCX8150526.1 serine/threonine protein kinase [Candidatus Bathyarchaeota archaeon] diamond 654 53.9 0.992578849721707 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
32563911 32563911 PRJEB81463_P_NODE_23039_length_249_cov_0.886364_g22767_i0 PRJEB81463 23039 249 0.886364 2.20704636 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 107 6.49e-26   NR MDW0166450.1 2169593 g22767 i0 98.3 1.39759036144578 58 1 69.9 0 248 75 243 300 MDW0166450.1 UbiA family prenyltransferase [Nitrososphaeraceae archaeon] diamond 348 107 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;