contig_metadata
18 rows where bioproject = "PRJEB81463", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6518514 | 6518514 | PRJEB81463_P_NODE_11606_length_298_cov_2.688889_g11334_i0 | PRJEB81463 | 11606 | 298 | 2.688889 | 8.01288922 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 496 | 1.06e-135 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g11334 | i0 | 96.644 | 82.1644295302013 | 298 | 10 | 100 | 0 | 1 | 298 | 1292577 | 1292280 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 24485 | 496 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 17575278 | 17575278 | PRJEB81463_P_NODE_22754_length_249_cov_1.329545_g22482_i0 | PRJEB81463 | 22754 | 249 | 1.329545 | 3.31056705 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 422 | 1.49e-113 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g22482 | i0 | 97.189 | 209.020080321285 | 249 | 7 | 100 | 0 | 1 | 249 | 2342 | 2094 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 52046 | 422 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 20541630 | 20541630 | PRJEB81463_P_NODE_5697_length_419_cov_2.286127_g5425_i0 | PRJEB81463 | 5697 | 419 | 2.286127 | 9.57887213 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 438 | 2.6499999999999998e-118 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g5425 | i0 | 85.615 | 326.326968973747 | 431 | 46 | 100 | 14 | 1 | 419 | 3447445 | 3447019 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 136731 | 438 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 20541642 | 20541642 | PRJEB81463_P_NODE_637_length_1228_cov_2.638095_g492_i0 | PRJEB81463 | 637 | 1228 | 2.638095 | 32.3958066 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 2019 | 0 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g492 | i0 | 96.341 | 223.758143322476 | 1230 | 42 | 100 | 2 | 1 | 1228 | 511138 | 512366 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 274775 | 2019 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 21817062 | 21817062 | PRJEB81463_P_NODE_11638_length_298_cov_1.400000_g11366_i0 | PRJEB81463 | 11638 | 298 | 1.4 | 4.172 | Pseudobdellovibrio sp. | 2862747 | Bacteria | Bacteria | 137 | 1.76e-38 | NR | MCC2678032.1 | 2862747 | g11366 | i0 | 76.7 | 3.6744966442953 | 90 | 21 | 90.6 | 0 | 283 | 14 | 2 | 91 | MCC2678032.1 fimbrial protein pilA [Pseudobdellovibrio sp.] | diamond | 1095 | 137 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio sp. | ||
| 26748970 | 26748970 | PRJEB81463_P_NODE_23661_length_248_cov_0.891429_g23389_i0 | PRJEB81463 | 23661 | 248 | 0.891429 | 2.21074392 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 165 | 3.63e-47 | NR | MCK6596183.1 | 2081706 | g23389 | i0 | 97.6 | 0.991935483870968 | 82 | 2 | 99.2 | 0 | 2 | 247 | 248 | 329 | MCK6596183.1 glutamate--tRNA ligase [Bacteriovoracaceae bacterium] | diamond | 246 | 165 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 27824163 | 27824163 | PRJEB81463_P_NODE_1524_length_814_cov_5.871795_g1291_i0 | PRJEB81463 | 1524 | 814 | 5.871795 | 47.7964113 | Bacteriovorax sp. | 2608087 | Bacteria | Bacteria | 191 | 6.4e-58 | NR | MDO9181423.1 | 2608087 | g1291 | i0 | 84.3 | 0.468058968058968 | 127 | 20 | 46.8 | 0 | 813 | 433 | 15 | 141 | MDO9181423.1 type II toxin-antitoxin system RelE/ParE family toxin [Bacteriovorax sp.] | diamond | 381 | 191 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax sp. | ||
| 27824164 | 27824164 | PRJEB81463_P_NODE_15544_length_274_cov_2.477612_g15272_i0 | PRJEB81463 | 15544 | 274 | 2.477612 | 6.78865688 | Bdellovibrio sp. | 28201 | Bacteria | Bacteria | 77.4 | 1.15e-14 | NR | MBC7743064.1 | 28201 | g15272 | i0 | 62.7 | 0.733576642335766 | 67 | 25 | 73.4 | 0 | 70 | 270 | 1 | 67 | MBC7743064.1 flagellin FliC [Bdellovibrio sp.] | diamond | 201 | 77.4 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 28392346 | 28392346 | PRJEB81463_P_NODE_25886_length_245_cov_0.906977_g25614_i0 | PRJEB81463 | 25886 | 245 | 0.906977 | 2.22209365 | Micavibrio sp. | 2024841 | Bacteria | Bacteria | 64.7 | 7e-10 | NR | MDE1153754.1 | 2024841 | g25614 | i0 | 44.9 | 0.844897959183673 | 69 | 38 | 84.5 | 0 | 243 | 37 | 131 | 199 | MDE1153754.1 ankyrin repeat domain-containing protein [Micavibrio sp.] | diamond | 207 | 64.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio sp. | ||
| 28802564 | 28802564 | PRJEB81463_P_NODE_9188_length_332_cov_1.810811_g8916_i0 | PRJEB81463 | 9188 | 332 | 1.810811 | 6.01189252 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 100 | 2.01e-25 | NR | MCK6594133.1 | 2081706 | g8916 | i0 | 80 | 0.542168674698795 | 60 | 12 | 54.2 | 0 | 304 | 125 | 1 | 60 | MCK6594133.1 hypothetical protein [Bacteriovoracaceae bacterium] | diamond | 180 | 100 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 28992573 | 28992573 | PRJEB81463_P_NODE_22008_length_250_cov_1.615819_g21736_i0 | PRJEB81463 | 22008 | 250 | 1.615819 | 4.0395475 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 139 | 5.61e-36 | NR | WP_102242528.1 | 960 | g21736 | i0 | 84.1 | 0.984 | 82 | 13 | 98.4 | 0 | 3 | 248 | 502 | 583 | WP_102242528.1 endopeptidase La [Bacteriovorax stolpii] | diamond | 246 | 139 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 29181867 | 29181867 | PRJEB81463_P_NODE_23549_length_248_cov_0.891429_g23277_i0 | PRJEB81463 | 23549 | 248 | 0.891429 | 2.21074392 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 150 | 3.95e-40 | NR | MES2528511.1 | 3034175 | g23277 | i0 | 86.6 | 0.991935483870968 | 82 | 11 | 99.2 | 0 | 248 | 3 | 1077 | 1158 | MES2528511.1 translocation/assembly module TamB domain-containing protein [Bdellovibrionota bacterium] | diamond | 246 | 150 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 29591763 | 29591763 | PRJEB81463_P_NODE_11890_length_295_cov_1.400901_g11618_i0 | PRJEB81463 | 11890 | 295 | 1.400901 | 4.13265795 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 43.1 | 0.0366 | NR | MBK8201443.1 | 2053517 | g11618 | i0 | 32.1 | 0.569491525423729 | 56 | 38 | 56.9 | 0 | 276 | 109 | 124 | 179 | MBK8201443.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 168 | 43.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 29686563 | 29686563 | PRJEB81463_P_NODE_22110_length_250_cov_0.881356_g21838_i0 | PRJEB81463 | 22110 | 250 | 0.881356 | 2.20339 | Bdellovibrio sp. CG_4_9_14_3_um_filter_39_7 | 1975525 | Bacteria | Bacteria | 66.6 | 5.88e-11 | NR | PJB53603.1 | 1975525 | g21838 | i0 | 40 | 0.96 | 80 | 48 | 96 | 0 | 248 | 9 | 76 | 155 | PJB53603.1 MAG: hypothetical protein CO099_06135 [Bdellovibrio sp. CG_4_9_14_3_um_filter_39_7] | diamond | 240 | 66.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. CG_4_9_14_3_um_filter_39_7 | ||
| 30824152 | 30824152 | PRJEB81463_P_NODE_27274_length_243_cov_0.917647_g27002_i0 | PRJEB81463 | 27274 | 243 | 0.917647 | 2.22988221 | Bdellovibrio sp. | 28201 | Bacteria | Bacteria | 136 | 6.329999999999999e-37 | NR | NUN06910.1 | 28201 | g27002 | i0 | 87.3 | 3.91358024691358 | 79 | 10 | 97.5 | 0 | 6 | 242 | 211 | 289 | NUN06910.1 tryptophan--tRNA ligase [Bdellovibrio sp.] | diamond | 951 | 136 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 31740886 | 31740886 | PRJEB81463_P_NODE_26397_length_244_cov_1.421053_g26125_i0 | PRJEB81463 | 26397 | 244 | 1.421053 | 3.46736932 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 75.1 | 1.47e-13 | NR | MEK6627748.1 | 3034175 | g26125 | i0 | 54.4 | 0.836065573770492 | 68 | 31 | 83.6 | 0 | 242 | 39 | 103 | 170 | MEK6627748.1 FHA domain-containing protein [Bdellovibrionota bacterium] | diamond | 204 | 75.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 31962433 | 31962433 | PRJEB81463_P_NODE_6738_length_385_cov_2.826923_g6466_i0 | PRJEB81463 | 6738 | 385 | 2.826923 | 10.88365355 | Bdellovibrio sp. | 28201 | Bacteria | Bacteria | 87.8 | 1.87e-18 | NR | MBC7464793.1 | 28201 | g6466 | i0 | 50 | 0.779220779220779 | 100 | 47 | 76.4 | 2 | 91 | 384 | 4 | 102 | MBC7464793.1 hypothetical protein [Bdellovibrio sp.] | diamond | 300 | 87.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 32721123 | 32721123 | PRJEB81463_P_NODE_9900_length_321_cov_0.943548_g9628_i0 | PRJEB81463 | 9900 | 321 | 0.943548 | 3.02878908 | Bdellovibrionales bacterium RIFCSPHIGHO2_ | 2053517 | Bacteria | Bacteria | 102 | 4.579999999999999e-23 | NR | OFZ28958.1 | 1797389 | g9628 | i0 | 49 | 0.97196261682243 | 104 | 52 | 96.3 | 1 | 310 | 2 | 191 | 294 | OFZ28958.1 MAG: hypothetical protein A2622_12730 [Bdellovibrionales bacterium RIFCSPHIGHO2_01_FULL_40_29] | diamond | 312 | 102 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium RIFCSPHIGHO2_01_FULL_40_29 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;