RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB81463", tax_kingdom = "Orthornavirae" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJEB81463 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12476276 12476276 PRJEB81463_P_NODE_17870_length_263_cov_1.347368_g17598_i0 PRJEB81463 17870 263 1.347368 3.54357784 Tobamovirus 12234 Viruses Viruses 481 2.58e-131   NTclustered gi|2647550519|gb|OR843964.1| 12242 g17598 i0 99.62 100 263 1 100 0 1 263 2220 2482 Tobacco mosaic virus strain MR644-18E/3430 nonstructural polyprotein p183, nonstructural polyprotein p126, and movement protein genes, partial cds blastn 26300 481 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
17992040 17992040 PRJEB81463_P_NODE_24095_length_247_cov_1.781609_g23823_i0 PRJEB81463 24095 247 1.781609 4.40057423 Orthoflavivirus zikaense 3048459 Viruses Viruses 455 1.4600000000000002e-123   NTclustered gi|1920873795|gb|MW122411.1| 64320 g23823 i0 100 99.5951417004049 246 0 99 0 1 246 7600 7845 Zika virus isolate PR/DB-ZIKV556/2016 polyprotein (POLY) gene, complete cds blastn 24600 455 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae Orthoflavivirus Orthoflavivirus zikaense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;