RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJEB81463" and tax_kingdom = "Orthornavirae"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 6 ✖

bioproject 1

  • PRJEB81463 · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2690451 2690451 PRJEB81463_P_NODE_16443_length_269_cov_5.989796_g16171_i0 PRJEB81463 16443 269 5.989796 16.11255124 Mitovirus sp. 2587224 Viruses Viruses 119 2.4e-22   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g16171 i0 90.909 0.327137546468401 88 8 33 0 17 104 24 111 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 88 119 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
5243013 5243013 PRJEB81463_P_NODE_18265_length_261_cov_1.659574_g17993_i0 PRJEB81463 18265 261 1.659574 4.33148814 Betacoronavirus pandemicum 3418604 Viruses Viruses 483 7.12e-132   NTclustered gi|2499447400|emb|OX492971.1| 2697049 g17993 i0 100 100 261 0 100 0 1 261 2753 2493 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 26100 483 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
12476276 12476276 PRJEB81463_P_NODE_17870_length_263_cov_1.347368_g17598_i0 PRJEB81463 17870 263 1.347368 3.54357784 Tobamovirus 12234 Viruses Viruses 481 2.58e-131   NTclustered gi|2647550519|gb|OR843964.1| 12242 g17598 i0 99.62 100 263 1 100 0 1 263 2220 2482 Tobacco mosaic virus strain MR644-18E/3430 nonstructural polyprotein p183, nonstructural polyprotein p126, and movement protein genes, partial cds blastn 26300 481 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
12893957 12893957 PRJEB81463_P_NODE_18831_length_258_cov_2.232432_g18559_i0 PRJEB81463 18831 258 2.232432 5.75967456 Betacoronavirus pandemicum 3418604 Viruses Viruses 477 3.2699999999999985e-130   NTclustered gi|2578840253|gb|OR564664.1| 2697049 g18559 i0 100 100 258 0 100 0 1 258 22012 21755 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/NY-CDC-QDX84542173/2023 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), and ORF7b (ORF7b) genes, complete cds; ORF8 gene, complete sequence; and nucleocapsid phosphoprotein (N) and ORF10 protein (ORF10) genes, complete cds blastn 25800 477 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
17992040 17992040 PRJEB81463_P_NODE_24095_length_247_cov_1.781609_g23823_i0 PRJEB81463 24095 247 1.781609 4.40057423 Orthoflavivirus zikaense 3048459 Viruses Viruses 455 1.4600000000000002e-123   NTclustered gi|1920873795|gb|MW122411.1| 64320 g23823 i0 100 99.5951417004049 246 0 99 0 1 246 7600 7845 Zika virus isolate PR/DB-ZIKV556/2016 polyprotein (POLY) gene, complete cds blastn 24600 455 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae Orthoflavivirus Orthoflavivirus zikaense
32808213 32808213 PRJEB81463_P_NODE_7740_length_361_cov_1.885417_g7468_i0 PRJEB81463 7740 361 1.885417 6.80635537 Chuvivirus 2842604 Viruses Viruses 162 9.56e-45   NR UVF58769.1 2842604 g7468 i0 61.3 2.96675900277008 119 46 98.9 0 4 360 288 406 UVF58769.1 MAG: S protein [Salarius guttatus piscichuvirus] diamond 1071 162 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus Chuvivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;