RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB81463", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB81463 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16300091 16300091 PRJEB81463_P_NODE_30893_length_199_cov_5.817460_g30621_i0 PRJEB81463 30893 199 5.81746 11.5767454 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 67 4.4e-11   NR ETO08814.1 46433 g30621 i0 55.8 3.85929648241206 52 23 78.4 0 2 157 255 306 ETO08814.1 EH domain-containing protein 4, partial [Reticulomyxa filosa] diamond 768 67 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28140002 28140002 PRJEB81463_P_NODE_21765_length_251_cov_0.876404_g21493_i0 PRJEB81463 21765 251 0.876404 2.19977404 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 107 4.8e-25   NR ETO12540.1 46433 g21493 i0 61.9 1.00398406374502 84 30 98 1 6 251 272 355 ETO12540.1 hypothetical protein RFI_24836 [Reticulomyxa filosa] diamond 252 107 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;