RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB81463", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJEB81463 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27532520 27532520 PRJEB81463_P_NODE_28863_length_237_cov_2.835366_g28591_i0 PRJEB81463 28863 237 2.835366 6.71981742 PVC group 1783257 Bacteria Bacteria 79.3 4.23e-15   NR OGW79723.1 1801819 g28591 i0 44.3 15 79 43 98.7 1 3 236 371 449 OGW79723.1 MAG: homospermidine synthase [Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_45_28] diamond 3555 79.7 0.994981179422836 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_45_28
28171282 28171282 PRJEB81463_P_NODE_18366_length_261_cov_1.010638_g18094_i0 PRJEB81463 18366 261 1.010638 2.63776518 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 109 4.71e-26   NR HCM42534.1 2035772 g18094 i0 55.2 13 87 39 100 0 261 1 199 285 HCM42534.1 elongation factor Tu [Candidatus Omnitrophota bacterium] diamond 3393 109 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;