RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB81463", tax_clade = "Methanomada group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Methanomada group · 2 ✖

bioproject 1

  • PRJEB81463 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24366308 24366308 PRJEB81463_P_NODE_23620_length_248_cov_0.891429_g23348_i0 PRJEB81463 23620 248 0.891429 2.21074392 Methanobacterium petrolearium 710190 Archaea Archaea 303 5.61e-78   NTclustered gi|2465759960|dbj|AP027739.1| 710190 g23348 i0 88.98 1.9758064516129 245 27 99 0 4 248 736788 736544 Methanobacterium petrolearium NBRC 105198 DNA, complete genome blastn 490 303 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium petrolearium
28100712 28100712 PRJEB81463_P_NODE_8145_length_352_cov_2.114695_g7873_i0 PRJEB81463 8145 352 2.114695 7.4437264 Methanobacterium 2160 Archaea Archaea 58.9 2.92e-7   NR WP_179288743.1 2161 g7873 i0 43.6 1.32954545454545 78 40 63.9 2 274 50 827 903 WP_179288743.1 chitobiase/beta-hexosaminidase C-terminal domain-containing protein [Methanobacterium bryantii] diamond 468 58.9 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium bryantii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;