RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJEB81463", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJEB81463 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16300102 16300102 PRJEB81463_P_NODE_6733_length_385_cov_3.253205_g6461_i0 PRJEB81463 6733 385 3.253205 12.52483925 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 84.7 2.55e-18   NR KAJ4453711.1 342808 g6461 i0 56.6 0.592207792207792 76 30 59.2 1 364 137 2 74 KAJ4453711.1 putative 60S acidic ribosomal protein P1 [Paratrimastix pyriformis] diamond 228 84.7 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
31393262 31393262 PRJEB81463_P_NODE_17556_length_264_cov_1.649215_g17284_i0 PRJEB81463 17556 264 1.649215 4.3539276 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 55.1 4.7e-7   NR KAK2944236.1 2049346 g17284 i0 62 1.13636363636364 50 10 46.6 1 141 263 28 77 KAK2944236.1 hypothetical protein BLNAU_20846 [Blattamonas nauphoetae] diamond 300 55.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;