RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB81463", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJEB81463 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6518722 6518722 PRJEB81463_P_NODE_24366_length_247_cov_0.896552_g24094_i0 PRJEB81463 24366 247 0.896552 2.21448344 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 52.8 0.022   NTclustered gi|123472433|ref|XM_001319376.1| 412133 g24094 i0 86.275 0.206477732793522 51 4 19 1 79 126 7036 6986 Trichomonas vaginalis G3 nuclear chaperone required for maturation and nuclear export of pre-60s ribosome subunits (TVAGG3_0617170), partial mRNA blastn 51 52.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
27950358 27950358 PRJEB81463_P_NODE_16825_length_267_cov_3.871134_g16553_i0 PRJEB81463 16825 267 3.871134 10.33592778 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 84 7.49e-18   NR XP_068360038.1 1144522 g16553 i0 51.1 6.92134831460674 88 43 98.9 0 2 265 91 178 XP_068360038.1 40S ribosomal protein S9-1 [Tritrichomonas foetus] diamond 1848 84 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;