RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB81463", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJEB81463 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28613358 28613358 PRJEB81463_P_NODE_13227_length_286_cov_2.474178_g12955_i0 PRJEB81463 13227 286 2.474178 7.07614908 Minisyncoccota bacterium 2053589 Bacteria Bacteria 79.3 7.11e-16   NR MEX0596344.1 2053589 g12955 i0 86.4 0.461538461538462 44 6 46.2 0 147 278 1 44 MEX0596344.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 132 79.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28865915 28865915 PRJEB81463_P_NODE_25788_length_245_cov_0.906977_g25516_i0 PRJEB81463 25788 245 0.906977 2.22209365 Minisyncoccota bacterium 2053589 Bacteria Bacteria 106 1.03e-27   NR HMA78398.1 2053589 g25516 i0 63 0.991836734693878 81 29 99.2 1 3 245 7 86 HMA78398.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 243 106 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29181870 29181870 PRJEB81463_P_NODE_2489_length_641_cov_2.399648_g2226_i0 PRJEB81463 2489 641 2.399648 15.38174368 Minisyncoccota bacterium 2053589 Bacteria Bacteria 96.3 9.04e-21   NR HMA77590.1 2053589 g2226 i0 66.2 0.332293291731669 71 24 33.2 0 419 631 75 145 HMA77590.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 213 96.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30571179 30571179 PRJEB81463_P_NODE_25173_length_246_cov_0.901734_g24901_i0 PRJEB81463 25173 246 0.901734 2.21826564 Minisyncoccota bacterium 2053589 Bacteria Bacteria 107 2.9300000000000003e-26   NR HXK40270.1 2053589 g24901 i0 69.1 0.98780487804878 81 25 98.8 0 246 4 120 200 HXK40270.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 243 107 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;