RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJEB81463", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 8 ✖

tax_clade 1

  • Apusozoa · 8 ✖

bioproject 1

  • PRJEB81463 · 8 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3966548 3966548 PRJEB81463_P_NODE_19044_length_257_cov_1.766304_g18772_i0 PRJEB81463 19044 257 1.766304 4.53940128 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 131 5.12e-34   NR XP_013753872.1 461836 g18772 i0 69.4 0.992217898832685 85 26 99.2 0 1 255 243 327 XP_013753872.1 isocitrate dehydrogenase [Thecamonas trahens ATCC 50062] diamond 255 131 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
14168769 14168769 PRJEB81463_P_NODE_1712_length_767_cov_2.384726_g1471_i0 PRJEB81463 1712 767 2.384726 18.29084842 Thecamonas trahens 529818 Root_unresolved Root_unresolved 69.4 7.64e-7   NTclustered gi|923118291|ref|XM_013897168.1| 461836 g1471 i0 89.474 0.475880052151239 57 3 7 1 565 621 931 878 Thecamonas trahens ATCC 50062 translation elongation factor Ts (AMSG_11511), partial mRNA blastn 365 69.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
21817455 21817455 PRJEB81463_P_NODE_7858_length_358_cov_4.547368_g7586_i0 PRJEB81463 7858 358 4.547368 16.27957744 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 124 1.3e-31   NR XP_013760592.1 461836 g7586 i0 60.9 7.86871508379888 110 40 91.3 2 3 329 233 340 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 2817 124 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27508444 27508444 PRJEB81463_P_NODE_4223_length_489_cov_1.406250_g3952_i0 PRJEB81463 4223 489 1.40625 6.8765625 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 86.7 1.71e-16   NR XP_013760602.1 461836 g3952 i0 36.7 0.969325153374233 158 70 96.3 4 17 487 2 130 XP_013760602.1 transcription factor lim1, variant [Thecamonas trahens ATCC 50062] diamond 474 86.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28613361 28613361 PRJEB81463_P_NODE_18947_length_258_cov_1.264865_g18675_i0 PRJEB81463 18947 258 1.264865 3.2633517 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 48.5 4.28e-4   NR XP_013762411.1 461836 g18675 i0 29.5 1.1046511627907 95 53 94.2 3 252 10 712 806 XP_013762411.1 uncharacterized protein AMSG_00680 [Thecamonas trahens ATCC 50062] diamond 285 48.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28676630 28676630 PRJEB81463_P_NODE_12967_length_288_cov_1.423256_g12695_i0 PRJEB81463 12967 288 1.423256 4.09897728 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 102 4.9199999999999987e-23   NR XP_013753152.1 461836 g12695 i0 52.9 2.09375 102 38 99 3 287 3 326 424 XP_013753152.1 phosphatidylglycerol specific phospholipase C [Thecamonas trahens ATCC 50062] diamond 603 102 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30128746 30128746 PRJEB81463_P_NODE_13292_length_286_cov_1.450704_g13020_i0 PRJEB81463 13292 286 1.450704 4.14901344 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 87.8 5.13e-18   NR XP_013761652.1 461836 g13020 i0 46.9 1.00699300699301 96 49 98.6 1 3 284 118 213 XP_013761652.1 glutaredoxin family protein [Thecamonas trahens ATCC 50062] diamond 288 87.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32215670 32215670 PRJEB81463_P_NODE_11138_length_304_cov_3.311688_g10866_i0 PRJEB81463 11138 304 3.311688 10.06753152 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 70.1 1.8e-11   NR XP_013755586.1 461836 g10866 i0 37.7 1.04605263157895 106 59 98.7 3 304 5 339 443 XP_013755586.1 pregnancy-associated glycoprotein 6 [Thecamonas trahens ATCC 50062] diamond 318 70.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;