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contig_metadata

29 rows where bioproject = "PRJEB81327" and tax_phylum = "Verrucomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 29 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB81327 · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
139751 139751 PRJEB81327_P_NODE_31441_length_276_cov_1.137931_g30833_i0 PRJEB81327 31441 276 1.137931 3.14068956 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 414 2.81e-111   NTclustered gi|2874253690|emb|OY969416.1| 412056 g30833 i0 94.139 185.31884057971 273 14 99 2 1 272 1315589 1315860 MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 blastn 51148 414 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
140116 140116 PRJEB81327_P_NODE_58441_length_244_cov_2.514620_g57833_i0 PRJEB81327 58441 244 2.51462 6.1356728 Lacunisphaera limnophila 1838286 Bacteria Bacteria 278 3.34e-70   NTclustered gi|1070531674|gb|CP016094.1| 1838286 g57833 i0 87.5 0.983606557377049 240 30 98 0 5 244 1057093 1057332 Lacunisphaera limnophila strain IG16b, complete genome blastn 240 278 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Lacunisphaera Lacunisphaera limnophila
1414541 1414541 PRJEB81327_P_NODE_45242_length_252_cov_1.720670_g44634_i0 PRJEB81327 45242 252 1.72067 4.3360884 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 162 8.96e-47   NR KAB2647605.1 2026799 g44634 i0 89.3 2 84 9 100 0 1 252 238 321 KAB2647605.1 MAG: 3-deoxy-7-phosphoheptulonate synthase [Verrucomicrobiota bacterium] diamond 504 162 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
10343227 10343227 PRJEB81327_P_NODE_69229_length_211_cov_4.181159_g68621_i0 PRJEB81327 69229 211 4.181159 8.82224549 Luteolibacter sp. SL250 2995170 Bacteria Bacteria 291 3.61e-74   NTclustered gi|2381117106|gb|CP113054.1| 2995170 g68621 i0 91.469 1 211 18 100 0 1 211 1015008 1014798 Luteolibacter sp. SL250 chromosome blastn 211 291 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. SL250
11618692 11618692 PRJEB81327_P_NODE_63390_length_242_cov_0.911243_g62782_i0 PRJEB81327 63390 242 0.911243 2.20520806 Akkermansiaceae bacterium 2562705 Bacteria Bacteria 265 2.5699999999999997e-66   NTclustered gi|2022020957|gb|CP059069.1| 2562705 g62782 i0 87.124 2.83057851239669 233 30 96 0 1 233 4165440 4165672 Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome blastn 685 265 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae   Akkermansiaceae bacterium
14168253 14168253 PRJEB81327_P_NODE_3972_length_754_cov_3.058737_g3426_i0 PRJEB81327 3972 754 3.058737 23.06287698 Luteolibacter sp. SL250 2995170 Bacteria Bacteria 1315 0   NTclustered gi|2381117106|gb|CP113054.1| 2995170 g3426 i0 98.143 287.013262599469 754 14 100 0 1 754 4717191 4716438 Luteolibacter sp. SL250 chromosome blastn 216408 1315 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. SL250
17991214 17991214 PRJEB81327_P_NODE_24455_length_288_cov_2.111628_g23847_i0 PRJEB81327 24455 288 2.111628 6.08148864 Luteolibacter 518753 Bacteria Bacteria 178 3.3399999999999994e-52   NR WP_226895337.1 2776705 g23847 i0 90.6 4 96 9 100 0 1 288 135 230 WP_226895337.1 Glu/Leu/Phe/Val family dehydrogenase [Luteolibacter marinus] diamond 1152 179 0.994413407821229 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter marinus
26748954 26748954 PRJEB81327_P_NODE_39241_length_262_cov_2.185185_g38633_i0 PRJEB81327 39241 262 2.185185 5.7251847 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 105 4.07e-24   NR MCB1224346.1 2026801 g38633 i0 63.2 0.99618320610687 87 28 99.6 3 1 261 624 706 MCB1224346.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Verrucomicrobiales bacterium] diamond 261 105 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
27223719 27223719 PRJEB81327_P_NODE_52623_length_248_cov_0.880000_g52015_i0 PRJEB81327 52623 248 0.88 2.1824 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 157 1.4e-43   NR MBL9167447.1 2026801 g52015 i0 81.7 0.991935483870968 82 15 99.2 0 247 2 214 295 MBL9167447.1 PQQ-like beta-propeller repeat protein [Verrucomicrobiales bacterium] diamond 246 157 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
27476666 27476666 PRJEB81327_P_NODE_6683_length_548_cov_2.515789_g6085_i0 PRJEB81327 6683 548 2.515789 13.78652372 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 45.4 0.0328   NR MEI6341235.1 2026799 g6085 i0 26.9 0.651459854014598 119 55 64.1 2 110 460 78 166 MEI6341235.1 permease prefix domain 1-containing protein [Verrucomicrobiota bacterium] diamond 357 45.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27792559 27792559 PRJEB81327_P_NODE_53564_length_247_cov_0.885057_g52956_i0 PRJEB81327 53564 247 0.885057 2.18609079 Terrimicrobiaceae bacterium 2832348 Bacteria Bacteria 104 8.01e-24   NR HRJ72875.1 2832348 g52956 i0 54.4 0.959514170040486 79 36 96 0 6 242 368 446 HRJ72875.1 DUF4838 domain-containing protein [Terrimicrobiaceae bacterium] diamond 237 104 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Terrimicrobiia Terrimicrobiales Terrimicrobiaceae   Terrimicrobiaceae bacterium
28044952 28044952 PRJEB81327_P_NODE_23705_length_290_cov_1.258065_g23097_i0 PRJEB81327 23705 290 1.258065 3.6483885 Terrimicrobiaceae bacterium 2832348 Bacteria Bacteria 160 3.5599999999999997e-48   NR HEY5953140.1 2832348 g23097 i0 78.9 1.12758620689655 109 10 99.3 1 290 3 5 113 HEY5953140.1 universal stress protein [Terrimicrobiaceae bacterium] diamond 327 160 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Terrimicrobiia Terrimicrobiales Terrimicrobiaceae   Terrimicrobiaceae bacterium
28202678 28202678 PRJEB81327_P_NODE_60906_length_243_cov_0.905882_g60298_i0 PRJEB81327 60906 243 0.905882 2.20129326 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 125 2.69e-34   NR PYK66733.1 2026799 g60298 i0 76.5 1 81 15 100 1 243 1 3 79 PYK66733.1 MAG: hypothetical protein DME45_11850 [Verrucomicrobiota bacterium] diamond 243 125 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28424039 28424039 PRJEB81327_P_NODE_60606_length_243_cov_1.711765_g59998_i0 PRJEB81327 60606 243 1.711765 4.15958895 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 61.2 5.05e-10   NR MBU6401794.1 2026799 g59998 i0 53.1 0.790123456790123 64 28 79 1 1 192 17 78 MBU6401794.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 192 61.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28487114 28487114 PRJEB81327_P_NODE_23747_length_290_cov_1.161290_g23139_i0 PRJEB81327 23747 290 1.16129 3.367741 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 132 6.99e-34   NR NBT90460.1 2026799 g23139 i0 76 0.993103448275862 96 23 99.3 0 289 2 226 321 NBT90460.1 GHKL domain-containing protein [Verrucomicrobiota bacterium] diamond 288 132 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28929099 28929099 PRJEB81327_P_NODE_23548_length_290_cov_1.419355_g22940_i0 PRJEB81327 23548 290 1.419355 4.1161295 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 177 3.82e-52   NR MEK7781868.1 2026799 g22940 i0 86.5 0.993103448275862 96 13 99.3 0 3 290 111 206 MEK7781868.1 glycosyltransferase family 2 protein [Verrucomicrobiota bacterium] diamond 288 177 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28929112 28929112 PRJEB81327_P_NODE_53888_length_247_cov_0.885057_g53280_i0 PRJEB81327 53888 247 0.885057 2.18609079 Luteolibacter sp. Populi 3230487 Bacteria Bacteria 115 4.029999999999999e-31   NR WP_367872191.1 3230487 g53280 i0 75.7 0.898785425101215 74 18 89.9 0 222 1 7 80 WP_367872191.1 VOC family protein [Luteolibacter sp. Populi] diamond 222 115 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. Populi
28960941 28960941 PRJEB81327_P_NODE_9528_length_446_cov_1.048257_g8920_i0 PRJEB81327 9528 446 1.048257 4.67522622 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 45.8 0.0154   NR HVV71216.1 2499141 g8920 i0 33.3 0.565022421524664 84 45 49.1 2 438 220 9 92 HVV71216.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 252 45.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
29939682 29939682 PRJEB81327_P_NODE_56091_length_246_cov_0.890173_g55483_i0 PRJEB81327 56091 246 0.890173 2.18982558 Luteolibacter luteus 2728835 Bacteria Bacteria 105 3.58e-26   NR WP_169456759.1 2728835 g55483 i0 72 1 82 23 100 0 1 246 32 113 WP_169456759.1 OmpH family outer membrane protein [Luteolibacter luteus] diamond 246 105 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter luteus
30792524 30792524 PRJEB81327_P_NODE_41914_length_258_cov_1.432432_g41306_i0 PRJEB81327 41914 258 1.432432 3.69567456 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 64.7 4.44e-10   NR MBI3416047.1 2026799 g41306 i0 91.4 1.23255813953488 35 3 40.7 0 255 151 225 259 MBI3416047.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 318 64.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30950734 30950734 PRJEB81327_P_NODE_26814_length_284_cov_1.459716_g26206_i0 PRJEB81327 26814 284 1.459716 4.14559344 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 60.5 3.58e-8   NR MEI6035099.1 2499141 g26206 i0 46.6 0.77112676056338 73 39 77.1 0 220 2 60 132 MEI6035099.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 219 60.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
31108353 31108353 PRJEB81327_P_NODE_26815_length_284_cov_1.459716_g26207_i0 PRJEB81327 26815 284 1.459716 4.14559344 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 152 1.7199999999999999e-43   NR MBL9168912.1 2026801 g26207 i0 79.8 0.992957746478873 94 19 99.3 0 3 284 80 173 MBL9168912.1 diaminopimelate epimerase [Verrucomicrobiales bacterium] diamond 282 152 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
31139728 31139728 PRJEB81327_P_NODE_55395_length_246_cov_0.890173_g54787_i0 PRJEB81327 55395 246 0.890173 2.18982558 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 87 2.56e-18   NR MEY4917778.1 2026799 g54787 i0 92.7 1.48780487804878 41 3 50 0 122 244 1 41 MEY4917778.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 366 87 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31930721 31930721 PRJEB81327_P_NODE_57397_length_245_cov_0.895349_g56789_i0 PRJEB81327 57397 245 0.895349 2.19360505 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 134 1.7799999999999998e-37   NR MFN0129168.1 2026801 g56789 i0 80.2 0.991836734693878 81 16 99.2 0 1 243 41 121 MFN0129168.1 ubiquinol-cytochrome c reductase iron-sulfur subunit [Verrucomicrobiales bacterium] diamond 243 134 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
32310815 32310815 PRJEB81327_P_NODE_51019_length_248_cov_3.731429_g50411_i0 PRJEB81327 51019 248 3.731429 9.25394392 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 152 1.7199999999999999e-43   NR HSH17137.1 2499141 g50411 i0 85.4 1.98387096774194 82 12 99.2 0 2 247 100 181 HSH17137.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 492 152 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
32556639 32556639 PRJEB81327_P_NODE_33419_length_272_cov_1.547739_g32811_i0 PRJEB81327 33419 272 1.547739 4.20985008 Opitutus 178440 Bacteria Bacteria 141 1.29e-36   NR MSU25104.1 1913982 g32811 i0 82.2 2.95588235294118 90 16 99.3 0 271 2 600 689 MSU25104.1 hypothetical protein [Opitutus sp.] diamond 804 141 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus sp.
32563881 32563881 PRJEB81327_P_NODE_27679_length_282_cov_3.100478_g27071_i0 PRJEB81327 27679 282 3.100478 8.74334796 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 109 1.6e-28   NR HYG84608.1 2499141 g27071 i0 83.3 0.702127659574468 66 11 70.2 0 281 84 66 131 HYG84608.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 198 109 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
32626493 32626493 PRJEB81327_P_NODE_35240_length_269_cov_1.571429_g34632_i0 PRJEB81327 35240 269 1.571429 4.22714401 Opitutaceae bacterium 2006848 Bacteria Bacteria 112 1.29e-26   NR HEV8073299.1 2006848 g34632 i0 59.3 6.5910780669145 86 34 95.9 1 2 259 96 180 HEV8073299.1 DUF2341 domain-containing protein [Opitutaceae bacterium] diamond 1773 112 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
32657770 32657770 PRJEB81327_P_NODE_37480_length_265_cov_2.072917_g36872_i0 PRJEB81327 37480 265 2.072917 5.49323005 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 131 3.32e-34   NR MCX6863674.1 2026799 g36872 i0 97.1 0.792452830188679 70 2 79.2 0 263 54 226 295 MCX6863674.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 210 131 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;