RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB81327" and tax_phylum = "Synergistota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB81327 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12893657 12893657 PRJEB81327_P_NODE_59411_length_244_cov_0.900585_g58803_i0 PRJEB81327 59411 244 0.900585 2.1974274 Thermanaerovibrio acidaminovorans 81462 Bacteria Bacteria 446 8.639999999999999e-121   NTclustered gi|269099254|gb|CP001818.1| 525903 g58803 i0 99.59 1 244 1 100 0 1 244 1739103 1738860 Thermanaerovibrio acidaminovorans DSM 6589, complete genome blastn 244 446 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Thermanaerovibrio Thermanaerovibrio acidaminovorans
31108358 31108358 PRJEB81327_P_NODE_48875_length_250_cov_0.870056_g48267_i0 PRJEB81327 48875 250 0.870056 2.17514 Synergistaceae bacterium 2053624 Bacteria Bacteria 104 8.48e-25   NR HOO62631.1 2053624 g48267 i0 56.6 1.944 83 33 99.6 1 1 249 103 182 HOO62631.1 pyridoxal-phosphate dependent enzyme [Synergistaceae bacterium] diamond 486 104 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;