RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB81327" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB81327 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10342663 10342663 PRJEB81327_P_NODE_21949_length_297_cov_1.031250_g21341_i0 PRJEB81327 21949 297 1.03125 3.0628125 Olpidium brassicae 70189 Fungi Fungi 177 3.59e-50   NR BAL15353.1 70189 g21341 i0 85.7 2.96969696969697 98 14 99 0 2 295 367 464 BAL15353.1 translation elongation factor 2, partial [Olpidium brassicae] diamond 882 177 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium brassicae
30027105 30027105 PRJEB81327_P_NODE_53871_length_247_cov_0.885057_g53263_i0 PRJEB81327 53871 247 0.885057 2.18609079 Fungi 4751 Fungi Fungi 84.3 3.83e-17   NR KAG5460166.1 278681 g53263 i0 52.6 7.10526315789474 76 36 92.3 0 20 247 162 237 KAG5460166.1 MAG: hypothetical protein BJ554DRAFT_7820, partial [Olpidium bornovanus] diamond 1755 84.7 0.995277449822904 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;