RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB81327", tax_clade = "Stenosarchaea group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 3 ✖

bioproject 1

  • PRJEB81327 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7792328 7792328 PRJEB81327_P_NODE_54467_length_247_cov_0.885057_g53859_i0 PRJEB81327 54467 247 0.885057 2.18609079 Haloprofundus halobius 2876194 Archaea Archaea 318 1.9899999999999998e-82   NTclustered gi|2099489105|gb|CP083668.1| 2876194 g53859 i0 89.879 3.21457489878543 247 25 100 0 1 247 101633 101879 Haloprofundus halobius strain SEDH52 plasmid unnamed2, complete sequence blastn 794 318 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloprofundus Haloprofundus halobius
21816969 21816969 PRJEB81327_P_NODE_65918_length_239_cov_4.626506_g65310_i0 PRJEB81327 65918 239 4.626506 11.05734934 Haloprofundus sp. MHR1 2572921 Archaea Archaea 52.8 0.021   NTclustered gi|1633225932|gb|CP039833.1| 2572921 g65310 i0 100 0.117154811715481 28 0 12 0 196 223 2006523 2006550 Haloprofundus sp. MHR1 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloprofundus Haloprofundus sp. MHR1
23092074 23092074 PRJEB81327_P_NODE_62299_length_242_cov_1.822485_g61691_i0 PRJEB81327 62299 242 1.822485 4.4104137 Methanocorpusculum sp. 2058474 Archaea Archaea 156 8.47e-44   NR HJK52518.1 2058474 g61691 i0 100 2.97520661157025 80 0 99.2 0 241 2 228 307 HJK52518.1 2-isopropylmalate synthase [Methanocorpusculum sp.] diamond 720 156 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;