RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB81327", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB81327 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9067165 9067165 PRJEB81327_P_NODE_39148_length_262_cov_2.740741_g38540_i0 PRJEB81327 39148 262 2.740741 7.18074142 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 479 9.249999999999999e-131   NTclustered gi|88792583|gb|DQ386164.1| 372086 g38540 i0 99.618 100.86641221374 262 1 100 0 1 262 1671 1932 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 26427 479 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
21816332 21816332 PRJEB81327_P_NODE_16638_length_331_cov_1.507752_g16030_i0 PRJEB81327 16638 331 1.507752 4.99065912 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 181 3.88e-53   NR MES1910618.1 1215613 g16030 i0 77.3 0.996978851963746 110 25 99.7 0 2 331 136 245 MES1910618.1 hypothetical protein [Cercozoa sp. M6MM] diamond 330 181 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
31329788 31329788 PRJEB81327_P_NODE_61536_length_243_cov_0.905882_g60928_i0 PRJEB81327 61536 243 0.905882 2.20129326 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 57.4 2.45e-7   NR MES1909771.1 1215613 g60928 i0 51.5 0.839506172839506 68 31 81.5 1 3 200 366 433 MES1909771.1 hypothetical protein [Cercozoa sp. M6MM] diamond 204 57.4 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;