RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB81327", tax_clade = "PVC group" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJEB81327 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28897393 28897393 PRJEB81327_P_NODE_42528_length_257_cov_1.347826_g41920_i0 PRJEB81327 42528 257 1.347826 3.46391282 Kiritimatiellota bacterium 2599938 Bacteria Bacteria 63.5 2.11e-9   NR MCX7007447.1 2599938 g41920 i0 67.4 0.501945525291829 43 14 50.2 0 2 130 35 77 MCX7007447.1 autotransporter-associated beta strand repeat-containing protein [Kiritimatiellota bacterium] diamond 129 63.5 1 Bacteria PVC group Pseudomonadati Kiritimatiellota         Kiritimatiellota bacterium
32088982 32088982 PRJEB81327_P_NODE_24618_length_288_cov_1.432558_g24010_i0 PRJEB81327 24618 288 1.432558 4.12576704 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 123 2.76e-30   NR HPC58775.1 2212473 g24010 i0 63.3 1.02083333333333 98 33 100 2 1 288 190 286 HPC58775.1 hypothetical protein [Kiritimatiellia bacterium] diamond 294 123 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;