RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJEB81327", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 5 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 5 ✖

bioproject 1

  • PRJEB81327 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23091611 23091611 PRJEB81327_P_NODE_2299_length_1011_cov_2.410448_g1868_i0 PRJEB81327 2299 1011 2.410448 24.36962928 Simkania sp. 34094 Bacteria Bacteria 283 1.2600000000000002e-91   NR MCB1084310.1 34094 g1868 i0 69.9 0.58160237388724 196 59 58.2 0 267 854 1 196 MCB1084310.1 hypothetical protein [Simkania sp.] diamond 588 283 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
28487136 28487136 PRJEB81327_P_NODE_68007_length_229_cov_2.564103_g67399_i0 PRJEB81327 68007 229 2.564103 5.87179587 Chlamydiales bacterium 2047757 Bacteria Bacteria 43.1 0.0126   NR MCP5470420.1 2047757 g67399 i0 69.7 0.432314410480349 33 10 43.2 0 229 131 93 125 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 99 43.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
28921655 28921655 PRJEB81327_P_NODE_63248_length_242_cov_0.911243_g62640_i0 PRJEB81327 63248 242 0.911243 2.20520806 Chlamydiia 204429 Bacteria Bacteria 137 9.29e-36   NR HXF28706.1 2047757 g62640 i0 87.5 2.97520661157025 80 10 99.2 0 240 1 369 448 HXF28706.1 DNA translocase FtsK [Chlamydiales bacterium] diamond 720 137 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
30413701 30413701 PRJEB81327_P_NODE_53653_length_247_cov_0.885057_g53045_i0 PRJEB81327 53653 247 0.885057 2.18609079 Chlamydiota bacterium 2081524 Bacteria Bacteria 84 1.22e-16   NR NGX37460.1 2081524 g53045 i0 46.2 0.947368421052632 78 41 94.7 1 235 2 93 169 NGX37460.1 hypothetical protein [Chlamydiota bacterium] diamond 234 84 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
31930707 31930707 PRJEB81327_P_NODE_11497_length_400_cov_2.871560_g10889_i0 PRJEB81327 11497 400 2.87156 11.48624 Chlamydiales bacterium 2047757 Bacteria Bacteria 79 1.59e-15   NR MCP5470420.1 2047757 g10889 i0 79.2 0.36 48 10 36 0 399 256 32 79 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 144 79 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;