RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB81327", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJEB81327 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
139565 139565 PRJEB81327_P_NODE_17721_length_321_cov_1.266129_g17113_i0 PRJEB81327 17721 321 1.266129 4.06427409 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 174 1.89e-53   NR XP_001322019.1 412133 g17113 i0 74.5 20.0093457943925 110 23 98.1 1 317 3 19 128 XP_001322019.1 peptidyl-prolyl cis-trans isomerase protein [Trichomonas vaginalis G3] diamond 6423 174 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
27918627 27918627 PRJEB81327_P_NODE_45565_length_252_cov_0.860335_g44957_i0 PRJEB81327 45565 252 0.860335 2.1680442 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 46.2 0.00239   NR XP_068345872.1 1144522 g44957 i0 33.3 2.30952380952381 69 40 77.4 2 197 3 348 414 XP_068345872.1 Ser/Thr protein phosphatase [Tritrichomonas foetus] diamond 582 46.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;