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contig_metadata

20 rows where bioproject = "PRJEB81327", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 20 ✖

tax_clade 1

  • Amoebozoa · 20 ✖

bioproject 1

  • PRJEB81327 · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
140097 140097 PRJEB81327_P_NODE_57021_length_245_cov_1.476744_g56413_i0 PRJEB81327 57021 245 1.476744 3.6180228 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 368 1.93e-97   NTclustered gi|300078498|gb|GU001160.1| 5755 g56413 i0 93.927 3.58367346938775 247 10 100 4 1 245 6398 6155 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 878 368 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
2689930 2689930 PRJEB81327_P_NODE_38523_length_263_cov_3.178947_g37915_i0 PRJEB81327 38523 263 3.178947 8.36063061 Platyamoeba sp. COHH 7 943227 Discosea other_Eukaryota 399 7.439999999999999e-107   NTclustered gi|319659362|gb|GU320599.1| 943227 g37915 i0 93.962 102.212927756654 265 14 100 2 1 263 391 127 Platyamoeba sp. COHH 7 18S ribosomal RNA gene, partial sequence blastn 26882 399 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. COHH 7
20540509 20540509 PRJEB81327_P_NODE_14817_length_350_cov_1.111913_g14209_i0 PRJEB81327 14817 350 1.111913 3.8916955 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 538 2.0799999999999993e-148   NTclustered gi|300078498|gb|GU001160.1| 5755 g14209 i0 94.382 17.4742857142857 356 10 100 8 1 350 5897 5546 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6116 538 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21816957 21816957 PRJEB81327_P_NODE_65118_length_241_cov_0.916667_g64510_i0 PRJEB81327 65118 241 0.916667 2.20916747 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 117 1.84e-28   NR XP_004340588.1 1257118 g64510 i0 72.7 2.87551867219917 77 21 95.9 0 236 6 283 359 XP_004340588.1 antioxidant, AhpC/TSA superfamily protein [Acanthamoeba castellanii str. Neff] diamond 693 117 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22673987 22673987 PRJEB81327_P_NODE_48998_length_250_cov_0.870056_g48390_i0 PRJEB81327 48998 250 0.870056 2.17514 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 75.5 1.01e-13   NR XP_004341586.1 1257118 g48390 i0 48.6 0.84 70 34 81.6 1 12 215 331 400 XP_004341586.1 elongation factor 1-gamma family protein [Acanthamoeba castellanii str. Neff] diamond 210 75.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22674094 22674094 PRJEB81327_P_NODE_61718_length_243_cov_0.905882_g61110_i0 PRJEB81327 61718 243 0.905882 2.20129326 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 100 1.9699999999999998e-23   NR XP_004341414.1 1257118 g61110 i0 64.2 1 81 29 100 0 243 1 181 261 XP_004341414.1 Factin-capping protein subunit alpha-2, putative [Acanthamoeba castellanii str. Neff] diamond 243 100 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26876349 26876349 PRJEB81327_P_NODE_61581_length_243_cov_0.905882_g60973_i0 PRJEB81327 61581 243 0.905882 2.20129326 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 67 7.41e-11   NR XP_004334118.1 1257118 g60973 i0 50.9 0.679012345679012 55 26 66.7 1 243 82 244 298 XP_004334118.1 CBS domain containing protein [Acanthamoeba castellanii str. Neff] diamond 165 67 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27192160 27192160 PRJEB81327_P_NODE_17862_length_320_cov_1.246964_g17254_i0 PRJEB81327 17862 320 1.246964 3.9902848 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 157 2.34e-45   NR XP_004337280.1 1257118 g17254 i0 67 16.89375 106 35 99.4 0 3 320 31 136 XP_004337280.1 40S ribosomal protein S3a, putative [Acanthamoeba castellanii str. Neff] diamond 5406 157 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27192175 27192175 PRJEB81327_P_NODE_64802_length_241_cov_0.916667_g64194_i0 PRJEB81327 64802 241 0.916667 2.20916747 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 52 1.84e-5   NR XP_004342310.1 1257118 g64194 i0 37.2 2.10373443983402 86 47 98.3 1 239 3 186 271 XP_004342310.1 DnaJ domain containing protein [Acanthamoeba castellanii str. Neff] diamond 507 52 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27318888 27318888 PRJEB81327_P_NODE_48383_length_250_cov_0.870056_g47775_i0 PRJEB81327 48383 250 0.870056 2.17514 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 58.5 9.51e-8   NR XP_004336616.1 1257118 g47775 i0 51.7 0.72 60 28 72 1 182 3 9 67 XP_004336616.1 ribosomal protein L10, putative [Acanthamoeba castellanii str. Neff] diamond 180 58.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27476655 27476655 PRJEB81327_P_NODE_16963_length_328_cov_1.207843_g16355_i0 PRJEB81327 16963 328 1.207843 3.96172504 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 118 1.41e-28   NR XP_004345874.1 1257118 g16355 i0 50 0.98780487804878 108 51 96 1 315 1 225 332 XP_004345874.1 adenylosuccinate synthase [Acanthamoeba castellanii str. Neff] diamond 324 118 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27918641 27918641 PRJEB81327_P_NODE_8865_length_465_cov_2.048469_g8257_i0 PRJEB81327 8865 465 2.048469 9.52538085 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 104 2.04e-25   NR XP_004348720.1 1257118 g8257 i0 43 0.870967741935484 135 71 86.5 2 52 453 1 130 XP_004348720.1 actin binding protein [Acanthamoeba castellanii str. Neff] diamond 405 104 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28802524 28802524 PRJEB81327_P_NODE_14188_length_358_cov_1.052632_g13580_i0 PRJEB81327 14188 358 1.052632 3.76842256 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 172 4.5700000000000003e-51   NR XP_004341414.1 1257118 g13580 i0 68.6 0.988826815642458 118 37 98.9 0 357 4 26 143 XP_004341414.1 Factin-capping protein subunit alpha-2, putative [Acanthamoeba castellanii str. Neff] diamond 354 172 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29371232 29371232 PRJEB81327_P_NODE_63249_length_242_cov_0.911243_g62641_i0 PRJEB81327 63249 242 0.911243 2.20520806 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 108 2.91e-25   NR XP_004336579.1 1257118 g62641 i0 62 1.95867768595041 79 30 97.9 0 237 1 395 473 XP_004336579.1 Prokumamolisin, activation domain containing protein [Acanthamoeba castellanii str. Neff] diamond 474 108 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30160433 30160433 PRJEB81327_P_NODE_45412_length_252_cov_1.525140_g44804_i0 PRJEB81327 45412 252 1.52514 3.8433528 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 106 1.36e-24   NR XP_004336481.1 1257118 g44804 i0 62.5 0.952380952380952 80 30 95.2 0 5 244 163 242 XP_004336481.1 calponin domain containing protein [Acanthamoeba castellanii str. Neff] diamond 240 106 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30192155 30192155 PRJEB81327_P_NODE_16852_length_329_cov_1.203125_g16244_i0 PRJEB81327 16852 329 1.203125 3.95828125 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 106 1.11e-26   NR XP_004339506.1 1257118 g16244 i0 50.9 0.966565349544073 106 49 96.7 1 11 328 12 114 XP_004339506.1 glia maturation factor family protein [Acanthamoeba castellanii str. Neff] diamond 318 106 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30887365 30887365 PRJEB81327_P_NODE_56974_length_245_cov_1.587209_g56366_i0 PRJEB81327 56974 245 1.587209 3.88866205 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 50.4 7.16e-5   NR XP_004342336.1 1257118 g56366 i0 34.6 0.991836734693878 81 47 98 3 5 244 316 391 XP_004342336.1 carboxypeptidase [Acanthamoeba castellanii str. Neff] diamond 243 50.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31077073 31077073 PRJEB81327_P_NODE_51175_length_248_cov_2.217143_g50567_i0 PRJEB81327 51175 248 2.217143 5.49851464 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 67.8 5.9e-11   NR XP_004333035.1 1257118 g50567 i0 39.3 1.01612903225806 84 49 99.2 1 2 247 362 445 XP_004333035.1 serine carboxypeptidase s28 protein [Acanthamoeba castellanii str. Neff] diamond 252 67.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32152322 32152322 PRJEB81327_P_NODE_15958_length_338_cov_1.415094_g15350_i0 PRJEB81327 15958 338 1.415094 4.78301772 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 124 1.28e-32   NR XP_004337280.1 1257118 g15350 i0 62.4 0.896449704142012 101 38 89.6 0 2 304 139 239 XP_004337280.1 40S ribosomal protein S3a, putative [Acanthamoeba castellanii str. Neff] diamond 303 124 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32878479 32878479 PRJEB81327_P_NODE_53900_length_247_cov_0.885057_g53292_i0 PRJEB81327 53900 247 0.885057 2.18609079 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 125 4.55e-32   NR XP_004339591.1 1257118 g53292 i0 70.7 0.995951417004049 82 23 99.6 1 1 246 265 345 XP_004339591.1 WD40 repeat protein, COMPASS complex protein [Acanthamoeba castellanii str. Neff] diamond 246 125 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;