contig_metadata
4 rows where bioproject = "PRJEB81171", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6099790 | 6099790 | PRJEB81171_P_NODE_2785_length_395_cov_4.931677_g2658_i0 | PRJEB81171 | 2785 | 395 | 4.931677 | 19.48012415 | Pristionchus | 54125 | Nematoda | Nematoda | 154 | 1.0099999999999999e-32 | NTclustered | gi|524845312|gb|KC819366.1| | 1355913 | g2658 | i0 | 80.18 | 29.4455696202532 | 222 | 30 | 54 | 11 | 97 | 311 | 263 | 49 | Pristionchus hoplostomus strain JU1090 subunit ribosomal protein 20 (rps-20) mRNA, partial cds | blastn | 11631 | 154 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus hoplostomus | |
| 6517518 | 6517518 | PRJEB81171_P_NODE_1946_length_473_cov_2.977500_g1822_i0 | PRJEB81171 | 1946 | 473 | 2.9775 | 14.083575 | Rhabditoides inermis | 96661 | Nematoda | Nematoda | 259 | 2.53e-64 | NTclustered | gi|256709332|gb|GQ422341.1| | 96661 | g1822 | i0 | 80.226 | 8.77167019027484 | 354 | 62 | 74 | 6 | 60 | 409 | 384 | 35 | Rhabditoides inermis large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds | blastn | 4149 | 259 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Rhabditoides | Rhabditoides inermis | |
| 28076474 | 28076474 | PRJEB81171_P_NODE_7485_length_255_cov_1.285714_g7358_i0 | PRJEB81171 | 7485 | 255 | 1.285714 | 3.2785707 | Aphelenchoides fujianensis | 1052528 | Nematoda | Nematoda | 68.2 | 4.4e-11 | NR | KAI6233889.1 | 1052528 | g7358 | i0 | 51.7 | 1.56470588235294 | 60 | 29 | 70.6 | 0 | 188 | 9 | 17 | 76 | KAI6233889.1 Filamin-C [Aphelenchoides fujianensis] | diamond | 399 | 68.2 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Aphelenchoididae | Aphelenchoides | Aphelenchoides fujianensis | |
| 28448366 | 28448366 | PRJEB81171_P_NODE_7966_length_251_cov_2.471910_g7839_i0 | PRJEB81171 | 7966 | 251 | 2.47191 | 6.2044941 | Pristionchus | 54125 | Nematoda | Nematoda | 60.1 | 3.12e-8 | NR | KAF8357760.1 | 54126 | g7839 | i0 | 89.3 | 1.00398406374502 | 28 | 3 | 33.5 | 0 | 84 | 1 | 1 | 28 | KAF8357760.1 best-18 [Pristionchus pacificus] | diamond | 252 | 60.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus pacificus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;