RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB81171", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJEB81171 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9066672 9066672 PRJEB81171_P_NODE_4008_length_331_cov_1.100775_g3881_i0 PRJEB81171 4008 331 1.100775 3.64356525 Bacteria 2 Bacteria Bacteria 124 1.5599999999999998e-31   NR HMS56499.1 2682144 g3881 i0 57.7 7.7583081570997 104 44 94.3 0 327 16 130 233 HMS56499.1 NAD(P)-dependent alcohol dehydrogenase [Fimbriimonadaceae bacterium] diamond 2568 125 0.992 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
26970850 26970850 PRJEB81171_P_NODE_9342_length_245_cov_0.906977_g9215_i0 PRJEB81171 9342 245 0.906977 2.22209365 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 51.6 1.66e-5   NR MCW3094605.1 2739509 g9215 i0 83.3 0.293877551020408 24 4 29.4 0 244 173 181 204 MCW3094605.1 nitroreductase [Chthonomonadaceae bacterium] diamond 72 51.6 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
29647583 29647583 PRJEB81171_P_NODE_2470_length_422_cov_1.971347_g2343_i0 PRJEB81171 2470 422 1.971347 8.31908434 Bacteria 2 Bacteria Bacteria 129 7.939999999999999e-34   NR WP_184201702.1 685828 g2343 i0 66.3 4.30805687203791 101 34 71.8 0 303 1 2 102 WP_184201702.1 glucose 1-dehydrogenase [Armatimonas rosea] diamond 1818 130 0.992307692307692 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea
30223758 30223758 PRJEB81171_P_NODE_8712_length_248_cov_0.891429_g8585_i0 PRJEB81171 8712 248 0.891429 2.21074392 Armatimonadota bacterium 2033014 Bacteria Bacteria 51.2 4.18e-5   NR MCC2671438.1 2033014 g8585 i0 42.2 1.8991935483871 83 39 99.2 3 2 247 1057 1131 MCC2671438.1 outer rane adhesin like protein [Armatimonadota bacterium] diamond 471 51.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;