RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJEB81171", tax_clade = "Sar" and tax_phylum = "Cercozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB81171 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1413978 1413978 PRJEB81171_P_NODE_3282_length_364_cov_1.388316_g3155_i0 PRJEB81171 3282 364 1.388316 5.05347024 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 601 2.7299999999999993e-167   NTclustered gi|238617605|gb|FJ973380.1| 45107 g3155 i0 96.438 99.5741758241758 365 12 100 1 1 364 1641 1277 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 36245 601 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
2689517 2689517 PRJEB81171_P_NODE_723_length_764_cov_2.477569_g608_i0 PRJEB81171 723 764 2.477569 18.92862716 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 274 3.22e-89   NR MES1912193.1 1215613 g608 i0 56.8 3.70680628272251 234 101 91.9 0 25 726 5 238 MES1912193.1 60S ribosomal protein L7B [Cercozoa sp. M6MM] diamond 2832 274 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;