RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB81171", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJEB81171 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19265005 19265005 PRJEB81171_P_NODE_8616_length_248_cov_1.628571_g8489_i0 PRJEB81171 8616 248 1.628571 4.03885608 Nitrospinota bacterium 2026769 Bacteria Bacteria 129 4.04e-33   NR MDH5511335.1 2026769 g8489 i0 75.3 2.93951612903226 81 20 98 0 2 244 97 177 MDH5511335.1 adenosylhomocysteinase [Nitrospinota bacterium] diamond 729 129 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
19265010 19265010 PRJEB81171_P_NODE_8836_length_247_cov_1.270115_g8709_i0 PRJEB81171 8836 247 1.270115 3.13718405 Bacteria 2 Bacteria Bacteria 125 6.1e-32   NR MED5578504.1 2026769 g8709 i0 71.6 7.87044534412955 81 23 98.4 0 4 246 309 389 MED5578504.1 hydroxymethylglutaryl-CoA reductase [Nitrospinota bacterium] diamond 1944 125 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;