RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB81171", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 3 ✖

tax_clade 1

  • Discoba · 3 ✖

bioproject 1

  • PRJEB81171 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5242081 5242081 PRJEB81171_P_NODE_7605_length_253_cov_1.588889_g7478_i0 PRJEB81171 7605 253 1.588889 4.01988917 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 52.8 0.023   NTclustered gi|1031970221|gb|CP015655.1| 85057 g7478 i0 100 0.110671936758893 28 0 11 0 218 245 50510 50537 Trypanosoma cruzi cruzi strain Sylvio X10/cl1 chromosome TcI5, partial sequence blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
20540288 20540288 PRJEB81171_P_NODE_2777_length_396_cov_1.826625_g2650_i0 PRJEB81171 2777 396 1.826625 7.233435 Euglena gracilis 3039 Euglenozoa other_Eukaryota 158 7.81e-34   NTclustered gi|197725559|gb|EU935857.1| 3039 g2650 i0 81.159 32.4368686868687 207 29 51 5 1 202 387 186 Euglena gracilis calmodulin 1 mRNA, partial cds blastn 12845 158 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
28739656 28739656 PRJEB81171_P_NODE_6187_length_276_cov_1.339901_g6060_i0 PRJEB81171 6187 276 1.339901 3.69812676 Leishmania donovani 5661 Euglenozoa other_Eukaryota 48.1 7.15e-4   NR TPP40392.1 5661 g6060 i0 45.2 0.91304347826087 42 22 44.6 1 254 132 979 1020 TPP40392.1 putative integral membrane protein [Leishmania donovani] diamond 252 48.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania donovani

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;