RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB81171", tax_clade = "Bacteria candidate phyla" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJEB81171 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23949096 23949096 PRJEB81171_P_NODE_5899_length_280_cov_1.864734_g5772_i0 PRJEB81171 5899 280 1.864734 5.2212552 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 130 2.87e-33   NR MEN9338664.1 2762014 g5772 i0 67.6 4.33928571428571 108 20 99.6 2 280 2 112 219 MEN9338664.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 1215 130 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
30887352 30887352 PRJEB81171_P_NODE_9954_length_242_cov_0.923077_g9827_i0 PRJEB81171 9954 242 0.923077 2.23384634 Minisyncoccota bacterium 2053589 Bacteria Bacteria 50.1 8.24e-5   NR MBP7846487.1 2053589 g9827 i0 57.9 0.471074380165289 38 16 47.1 0 8 121 230 267 MBP7846487.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 114 50.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31488207 31488207 PRJEB81171_P_NODE_1696_length_507_cov_3.278802_g1573_i0 PRJEB81171 1696 507 3.278802 16.62352614 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 109 4.02e-24   NR HWX21912.1 2838779 g1573 i0 43.2 1.0414201183432 176 89 99.4 4 2 505 527 699 HWX21912.1 HYR domain-containing protein [Candidatus Binatia bacterium] diamond 528 109 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;