RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB80557", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Nitrososphaerota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB80557 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26876322 26876322 PRJEB80557_S_NODE_20801_length_208_cov_3.182390_g20405_i0 PRJEB80557 20801 208 3.18239 6.6193712 Nitrososphaerota archaeon 2026795 Archaea Archaea 57.8 8.09e-9   NR TLX69261.1 2026795 g20405 i0 56.3 2.75480769230769 48 21 69.2 0 1 144 41 88 TLX69261.1 MAG: hypothetical protein E6L03_00525 [Nitrososphaerota archaeon] diamond 573 57.8 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
27792530 27792530 PRJEB80557_S_NODE_31024_length_174_cov_1.328000_g30628_i0 PRJEB80557 31024 174 1.328 2.31072 Candidatus Caldarchaeum sp. 2972665 Archaea Archaea 51.2 1.53e-5   NR MEM4382161.1 2972665 g30628 i0 46.2 0.896551724137931 52 23 81 1 31 171 504 555 MEM4382161.1 DUF262 domain-containing protein [Candidatus Caldarchaeum sp.] diamond 156 51.2 1 Archaea   Thermoproteati Nitrososphaerota   Candidatus Caldarchaeales Candidatus Caldarchaeaceae Candidatus Caldarchaeum Candidatus Caldarchaeum sp.
30729341 30729341 PRJEB80557_S_NODE_15014_length_242_cov_1.067358_g14618_i0 PRJEB80557 15014 242 1.067358 2.58300636 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 98.2 7.94e-25   NR MDW0190195.1 2169593 g14618 i0 100 1.21487603305785 49 0 60.7 0 3 149 31 79 MDW0190195.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 294 98.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;