RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJEB80557", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 5 ✖

tax_phylum 1

  • Kitrinoviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJEB80557 · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11617647 11617647 PRJEB80557_S_NODE_25730_length_190_cov_1.475177_g25334_i0 PRJEB80557 25730 190 1.475177 2.8028363 Tobamovirus tabaci 3432891 Viruses Viruses 346 6.690000000000001e-91   NTclustered gi|1590853289|gb|MH595919.1| 12242 g25334 i0 99.474 100 190 1 100 0 1 190 1056 867 Tobacco mosaic virus isolate Harbin-1, complete genome blastn 19000 346 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
21815833 21815833 PRJEB80557_S_NODE_25898_length_189_cov_2.300000_g25502_i0 PRJEB80557 25898 189 2.3 4.347 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.016   NTclustered gi|1995060321|gb|MN450069.1| 12164 g25502 i0 100 0.148148148148148 28 0 15 0 162 189 42 15 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
21815952 21815952 PRJEB80557_S_NODE_5178_length_379_cov_2.651515_g4782_i0 PRJEB80557 5178 379 2.651515 10.04924185 Potexvirus pepini 3433856 Viruses Viruses 649 0   NTclustered gi|2862449675|dbj|LC852412.1| 112229 g4782 i0 99.44 91.179419525066 357 2 94 0 23 379 6053 6409 Pepino mosaic virus JKT1 DNA, complete genome blastn 34557 649 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
23090935 23090935 PRJEB80557_S_NODE_10459_length_283_cov_2.145299_g10063_i0 PRJEB80557 10459 283 2.145299 6.07119617 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.026   NTclustered gi|1995060321|gb|MN450069.1| 12164 g10063 i0 100 0.0989399293286219 28 0 10 0 256 283 43 16 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
28234183 28234183 PRJEB80557_S_NODE_20386_length_210_cov_2.677019_g19990_i0 PRJEB80557 20386 210 2.677019 5.6217399 Soybean thrips tombus-like virus 1 2802943 Viruses Viruses 77.8 8.02e-15   NR QPZ88368.1 2796562 g19990 i0 53.6 2.95714285714286 69 32 98.6 0 2 208 236 304 QPZ88368.1 RNA-dependent RNA polymerase, partial [Soybean thrips tombus-like virus 10] diamond 621 77.8 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Soybean thrips tombus-like virus 10

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;